Protein–RNA interactions for Protein: Q12879

GRIN2A, Glutamate receptor ionotropic, NMDA 2A, humanhuman

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2AQ12879 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
GRIN2AQ12879 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
GRIN2AQ12879 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC34.88■■■■□ 3.17
GRIN2AQ12879 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC34.88■■■■□ 3.17
GRIN2AQ12879 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
GRIN2AQ12879 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC34.88■■■■□ 3.17
GRIN2AQ12879 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC34.87■■■■□ 3.17
GRIN2AQ12879 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC34.87■■■■□ 3.17
GRIN2AQ12879 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC34.87■■■■□ 3.17
GRIN2AQ12879 FAM210CP-201ENST00000445714 574 ntBASIC34.87■■■■□ 3.17
GRIN2AQ12879 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC34.87■■■■□ 3.17
GRIN2AQ12879 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
GRIN2AQ12879 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC34.87■■■■□ 3.17
GRIN2AQ12879 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC34.87■■■■□ 3.17
GRIN2AQ12879 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
GRIN2AQ12879 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC34.86■■■■□ 3.17
GRIN2AQ12879 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC34.86■■■■□ 3.17
GRIN2AQ12879 AC060766.5-201ENST00000590539 871 ntBASIC34.86■■■■□ 3.17
GRIN2AQ12879 AC243732.1-201ENST00000612648 864 ntBASIC34.86■■■■□ 3.17
GRIN2AQ12879 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
GRIN2AQ12879 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC34.86■■■■□ 3.17
GRIN2AQ12879 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC34.86■■■■□ 3.17
GRIN2AQ12879 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
GRIN2AQ12879 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
GRIN2AQ12879 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
GRIN2AQ12879 AL591742.1-201ENST00000604433 565 ntBASIC34.85■■■■□ 3.17
GRIN2AQ12879 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
GRIN2AQ12879 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
GRIN2AQ12879 KRT16P2-201ENST00000414673 1423 ntBASIC34.85■■■■□ 3.17
GRIN2AQ12879 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
GRIN2AQ12879 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
GRIN2AQ12879 MIR718-201ENST00000390190 70 ntBASIC34.84■■■■□ 3.17
GRIN2AQ12879 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC34.84■■■■□ 3.17
GRIN2AQ12879 GATS-209ENST00000454084 1030 ntTSL 3 BASIC34.84■■■■□ 3.17
GRIN2AQ12879 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC34.84■■■■□ 3.17
GRIN2AQ12879 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
GRIN2AQ12879 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
GRIN2AQ12879 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC34.84■■■■□ 3.17
GRIN2AQ12879 MIR1224-201ENST00000408193 85 ntBASIC34.84■■■■□ 3.17
GRIN2AQ12879 GXYLT1P3-201ENST00000453058 1193 ntBASIC34.84■■■■□ 3.17
GRIN2AQ12879 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
GRIN2AQ12879 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC34.84■■■■□ 3.17
GRIN2AQ12879 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
GRIN2AQ12879 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC34.83■■■■□ 3.17
GRIN2AQ12879 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
GRIN2AQ12879 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC34.83■■■■□ 3.17
GRIN2AQ12879 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
GRIN2AQ12879 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC34.83■■■■□ 3.17
GRIN2AQ12879 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC34.83■■■■□ 3.17
GRIN2AQ12879 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC34.83■■■■□ 3.17
GRIN2AQ12879 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC34.83■■■■□ 3.17
GRIN2AQ12879 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
GRIN2AQ12879 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC34.82■■■■□ 3.16
GRIN2AQ12879 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC34.82■■■■□ 3.16
GRIN2AQ12879 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
GRIN2AQ12879 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
GRIN2AQ12879 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC34.82■■■■□ 3.16
GRIN2AQ12879 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
GRIN2AQ12879 LINC00526-201ENST00000581067 1875 ntBASIC34.82■■■■□ 3.16
GRIN2AQ12879 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
GRIN2AQ12879 KRT17P1-201ENST00000399211 1546 ntBASIC34.81■■■■□ 3.16
GRIN2AQ12879 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC34.81■■■■□ 3.16
GRIN2AQ12879 OR7E47P-201ENST00000546390 1422 ntBASIC34.81■■■■□ 3.16
GRIN2AQ12879 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
GRIN2AQ12879 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC34.81■■■■□ 3.16
GRIN2AQ12879 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
GRIN2AQ12879 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
GRIN2AQ12879 AC010331.1-201ENST00000611423 582 ntBASIC34.81■■■■□ 3.16
GRIN2AQ12879 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC34.81■■■■□ 3.16
GRIN2AQ12879 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC34.81■■■■□ 3.16
GRIN2AQ12879 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
GRIN2AQ12879 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
GRIN2AQ12879 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
GRIN2AQ12879 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
GRIN2AQ12879 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
GRIN2AQ12879 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC34.8■■■■□ 3.16
GRIN2AQ12879 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
GRIN2AQ12879 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
GRIN2AQ12879 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC34.8■■■■□ 3.16
GRIN2AQ12879 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC34.8■■■■□ 3.16
GRIN2AQ12879 AC120498.10-201ENST00000621827 505 ntBASIC34.8■■■■□ 3.16
GRIN2AQ12879 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC34.8■■■■□ 3.16
GRIN2AQ12879 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC34.8■■■■□ 3.16
GRIN2AQ12879 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC34.8■■■■□ 3.16
GRIN2AQ12879 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
GRIN2AQ12879 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC34.79■■■■□ 3.16
GRIN2AQ12879 AC008175.2-201ENST00000612840 297 ntBASIC34.79■■■■□ 3.16
GRIN2AQ12879 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
GRIN2AQ12879 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC34.79■■■■□ 3.16
GRIN2AQ12879 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
GRIN2AQ12879 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
GRIN2AQ12879 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
GRIN2AQ12879 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
GRIN2AQ12879 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC34.78■■■■□ 3.16
GRIN2AQ12879 RPPH1-201ENST00000516869 333 ntBASIC34.78■■■■□ 3.16
GRIN2AQ12879 CD44-222ENST00000526025 1052 ntTSL 2 BASIC34.78■■■■□ 3.16
GRIN2AQ12879 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC34.78■■■■□ 3.16
GRIN2AQ12879 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC34.78■■■■□ 3.16
GRIN2AQ12879 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC34.78■■■■□ 3.16
GRIN2AQ12879 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC34.78■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms