Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YHR097CYHR097C 1101 nt4.98□□□□□ -1.61
MSH3P25336 GPP1YIL053W 753 nt4.98□□□□□ -1.61
MSH3P25336 NMA1YLR328W 1206 nt4.98□□□□□ -1.61
MSH3P25336 YCL022CYCL022C 516 nt4.98□□□□□ -1.61
MSH3P25336 PBN1YCL052C 1251 nt4.98□□□□□ -1.61
MSH3P25336 NTA1YJR062C 1374 nt4.98□□□□□ -1.61
MSH3P25336 MSS4YDR208W 2340 nt4.98□□□□□ -1.61
MSH3P25336 YCT1YLL055W 1596 nt4.98□□□□□ -1.61
MSH3P25336 PHR1YOR386W 1698 nt4.97□□□□□ -1.61
MSH3P25336 ARP4YJL081C 1470 nt4.97□□□□□ -1.61
MSH3P25336 MPC3YGR243W 441 nt4.97□□□□□ -1.61
MSH3P25336 YGR269WYGR269W 327 nt4.97□□□□□ -1.61
MSH3P25336 ISA1YLL027W 753 nt4.97□□□□□ -1.61
MSH3P25336 CDC42YLR229C 576 nt4.97□□□□□ -1.61
MSH3P25336 TMC1YOR052C 453 nt4.97□□□□□ -1.61
MSH3P25336 RPS11BYBR048W 471 nt4.97□□□□□ -1.61
MSH3P25336 YPL135C-AYPL135C-A 174 nt4.97□□□□□ -1.61
MSH3P25336 YPR170CYPR170C 336 nt4.97□□□□□ -1.61
MSH3P25336 HIS4YCL030C 2400 nt4.97□□□□□ -1.61
MSH3P25336 IMD2YHR216W 1572 nt4.96□□□□□ -1.62
MSH3P25336 YCR013CYCR013C 648 nt4.96□□□□□ -1.62
MSH3P25336 PBP4YDL053C 558 nt4.96□□□□□ -1.62
MSH3P25336 ARF2YDL137W 546 nt4.96□□□□□ -1.62
MSH3P25336 YDR381C-AYDR381C-A 345 nt4.96□□□□□ -1.62
MSH3P25336 IES5YER092W 378 nt4.96□□□□□ -1.62
MSH3P25336 YGR190CYGR190C 366 nt4.96□□□□□ -1.62
MSH3P25336 YHR050W-AYHR050W-A 171 nt4.96□□□□□ -1.62
MSH3P25336 COX2Q0250 756 nt4.96□□□□□ -1.62
MSH3P25336 SOP4YJL192C 705 nt4.96□□□□□ -1.62
MSH3P25336 ATG3YNR007C 933 nt4.96□□□□□ -1.62
MSH3P25336 RPS10AYOR293W 318 nt4.96□□□□□ -1.62
MSH3P25336 URC2YDR520C 2319 nt4.96□□□□□ -1.62
MSH3P25336 BOI2YER114C 3123 nt4.96□□□□□ -1.62
MSH3P25336 SWC3YAL011W 1878 nt4.96□□□□□ -1.62
MSH3P25336 MTL1YGR023W 1656 nt4.96□□□□□ -1.62
MSH3P25336 SUC2YIL162W 1599 nt4.95□□□□□ -1.62
MSH3P25336 CBF5YLR175W 1452 nt4.95□□□□□ -1.62
MSH3P25336 STB2YMR053C 2553 nt4.95□□□□□ -1.62
MSH3P25336 SAP4YGL229C 2457 nt4.95□□□□□ -1.62
MSH3P25336 TAM41YGR046W 1158 nt4.95□□□□□ -1.62
MSH3P25336 ASG7YJL170C 630 nt4.95□□□□□ -1.62
MSH3P25336 YJR037WYJR037W 384 nt4.95□□□□□ -1.62
MSH3P25336 TPK3YKL166C 1197 nt4.95□□□□□ -1.62
MSH3P25336 YLR125WYLR125W 411 nt4.95□□□□□ -1.62
MSH3P25336 YNL146WYNL146W 303 nt4.95□□□□□ -1.62
MSH3P25336 MSN1YOL116W 1149 nt4.95□□□□□ -1.62
MSH3P25336 YOR034C-AYOR034C-A 243 nt4.95□□□□□ -1.62
MSH3P25336 YBR012CYBR012C 420 nt4.95□□□□□ -1.62
MSH3P25336 HPA2YPR193C 471 nt4.95□□□□□ -1.62
MSH3P25336 snR24snR24 89 nt4.95□□□□□ -1.62
MSH3P25336 ECM32YER176W 3366 nt4.95□□□□□ -1.62
MSH3P25336 NNK1YKL171W 2787 nt4.95□□□□□ -1.62
MSH3P25336 HCM1YCR065W 1695 nt4.95□□□□□ -1.62
MSH3P25336 HUL4YJR036C 2679 nt4.95□□□□□ -1.62
MSH3P25336 YSH1YLR277C 2340 nt4.95□□□□□ -1.62
MSH3P25336 KRE2YDR483W 1329 nt4.95□□□□□ -1.62
MSH3P25336 RTT109YLL002W 1311 nt4.95□□□□□ -1.62
MSH3P25336 TRM11YOL124C 1302 nt4.95□□□□□ -1.62
MSH3P25336 HFA1YMR207C 6372 nt4.94□□□□□ -1.62
MSH3P25336 NUP2YLR335W 2163 nt4.94□□□□□ -1.62
MSH3P25336 YCR075W-AYCR075W-A 228 nt4.94□□□□□ -1.62
MSH3P25336 YDL187CYDL187C 330 nt4.94□□□□□ -1.62
MSH3P25336 ARC1YGL105W 1131 nt4.94□□□□□ -1.62
MSH3P25336 LSO1YJR005C-A 282 nt4.94□□□□□ -1.62
MSH3P25336 VPH2YKL119C 648 nt4.94□□□□□ -1.62
MSH3P25336 YLR171WYLR171W 390 nt4.94□□□□□ -1.62
MSH3P25336 ATG33YLR356W 594 nt4.94□□□□□ -1.62
MSH3P25336 YNR021WYNR021W 1215 nt4.94□□□□□ -1.62
MSH3P25336 MCM16YPR046W 546 nt4.94□□□□□ -1.62
MSH3P25336 UGA3YDL170W 1587 nt4.94□□□□□ -1.62
MSH3P25336 AFR1YDR085C 1863 nt4.94□□□□□ -1.62
MSH3P25336 YRB30YGL164C 1323 nt4.94□□□□□ -1.62
MSH3P25336 MSC2YDR205W 2175 nt4.94□□□□□ -1.62
MSH3P25336 PRP11YDL043C 801 nt4.93□□□□□ -1.62
MSH3P25336 BSC2YDR275W 708 nt4.93□□□□□ -1.62
MSH3P25336 VMA8YEL051W 771 nt4.93□□□□□ -1.62
MSH3P25336 YHR130CYHR130C 336 nt4.93□□□□□ -1.62
MSH3P25336 COA3YJL062W-A 258 nt4.93□□□□□ -1.62
MSH3P25336 PIR3YKL163W 978 nt4.93□□□□□ -1.62
MSH3P25336 RNP1YLL046C 750 nt4.93□□□□□ -1.62
MSH3P25336 YAR047CYAR047C 321 nt4.93□□□□□ -1.62
MSH3P25336 HTA2YBL003C 399 nt4.93□□□□□ -1.62
MSH3P25336 FBP1YLR377C 1047 nt4.93□□□□□ -1.62
MSH3P25336 MAG2YLR427W 2013 nt4.93□□□□□ -1.62
MSH3P25336 SWS2YNL081C 432 nt4.93□□□□□ -1.62
MSH3P25336 PHO80YOL001W 882 nt4.93□□□□□ -1.62
MSH3P25336 RPA43YOR340C 981 nt4.93□□□□□ -1.62
MSH3P25336 YPL088WYPL088W 1029 nt4.93□□□□□ -1.62
MSH3P25336 POF1YCL047C 777 nt4.93□□□□□ -1.62
MSH3P25336 KCC4YCL024W 3114 nt4.93□□□□□ -1.62
MSH3P25336 TRE1YPL176C 2352 nt4.93□□□□□ -1.62
MSH3P25336 ALG6YOR002W 1635 nt4.93□□□□□ -1.62
MSH3P25336 MCP2YLR253W 1710 nt4.92□□□□□ -1.62
MSH3P25336 ERG11YHR007C 1593 nt4.92□□□□□ -1.62
MSH3P25336 PUG1YER185W 912 nt4.92□□□□□ -1.62
MSH3P25336 REE1YJL217W 597 nt4.92□□□□□ -1.62
MSH3P25336 ATG10YLL042C 504 nt4.92□□□□□ -1.62
MSH3P25336 GLO1YML004C 981 nt4.92□□□□□ -1.62
MSH3P25336 TOM22YNL131W 459 nt4.92□□□□□ -1.62
MSH3P25336 YNL235CYNL235C 432 nt4.92□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms