Protein–RNA interactions for Protein: O14618

CCS, Copper chaperone for superoxide dismutase, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSO14618 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCSO14618 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSO14618 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CCSO14618 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CCSO14618 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSO14618 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCSO14618 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSO14618 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.67■□□□□ 0.42
CCSO14618 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
CCSO14618 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSO14618 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CCSO14618 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 AC104564.3-201ENST00000582367 638 ntBASIC17.67■□□□□ 0.42
CCSO14618 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSO14618 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSO14618 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSO14618 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCSO14618 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCSO14618 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSO14618 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSO14618 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.66■□□□□ 0.42
CCSO14618 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.66■□□□□ 0.42
CCSO14618 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.66■□□□□ 0.42
CCSO14618 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSO14618 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.66■□□□□ 0.42
CCSO14618 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCSO14618 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCSO14618 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
CCSO14618 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCSO14618 OXCT2P1-201ENST00000447263 1535 ntBASIC17.66■□□□□ 0.42
CCSO14618 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.66■□□□□ 0.42
CCSO14618 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.66■□□□□ 0.42
CCSO14618 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.65■□□□□ 0.42
CCSO14618 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCSO14618 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.65■□□□□ 0.42
CCSO14618 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCSO14618 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CCSO14618 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCSO14618 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.65■□□□□ 0.42
CCSO14618 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.65■□□□□ 0.42
CCSO14618 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCSO14618 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.65■□□□□ 0.42
CCSO14618 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.65■□□□□ 0.42
CCSO14618 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.65■□□□□ 0.42
CCSO14618 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.65■□□□□ 0.42
CCSO14618 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.65■□□□□ 0.42
CCSO14618 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCSO14618 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCSO14618 AC073314.1-201ENST00000568729 2216 ntBASIC17.64■□□□□ 0.42
CCSO14618 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCSO14618 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.64■□□□□ 0.41
CCSO14618 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.64■□□□□ 0.41
CCSO14618 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCSO14618 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCSO14618 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.64■□□□□ 0.41
CCSO14618 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 DUX4L4-201ENST00000566884 1269 ntBASIC17.64■□□□□ 0.41
CCSO14618 GABARAPL3-202ENST00000624044 1851 ntBASIC17.64■□□□□ 0.41
CCSO14618 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.64■□□□□ 0.41
CCSO14618 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSO14618 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms