Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 AP006587.3-201ENST00000525742 1516 ntBASIC19.76■□□□□ 0.75
SDF2Q99470 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SDF2Q99470 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.75■□□□□ 0.75
SDF2Q99470 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SDF2Q99470 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.75■□□□□ 0.75
SDF2Q99470 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 MIR572-201ENST00000384983 95 ntBASIC19.75■□□□□ 0.75
SDF2Q99470 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
SDF2Q99470 Z98882.1-201ENST00000622160 2253 ntBASIC19.75■□□□□ 0.75
SDF2Q99470 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.75■□□□□ 0.75
SDF2Q99470 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.75■□□□□ 0.75
SDF2Q99470 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2Q99470 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.74■□□□□ 0.75
SDF2Q99470 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDF2Q99470 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
SDF2Q99470 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDF2Q99470 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDF2Q99470 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.74■□□□□ 0.75
SDF2Q99470 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.74■□□□□ 0.75
SDF2Q99470 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.74■□□□□ 0.75
SDF2Q99470 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SDF2Q99470 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SDF2Q99470 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.74■□□□□ 0.75
SDF2Q99470 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDF2Q99470 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDF2Q99470 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SDF2Q99470 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.74■□□□□ 0.75
SDF2Q99470 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.73■□□□□ 0.75
SDF2Q99470 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.73■□□□□ 0.75
SDF2Q99470 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SDF2Q99470 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.73■□□□□ 0.75
SDF2Q99470 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SDF2Q99470 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.73■□□□□ 0.75
SDF2Q99470 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.73■□□□□ 0.75
SDF2Q99470 AL137060.1-201ENST00000618151 2648 ntBASIC19.73■□□□□ 0.75
SDF2Q99470 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SDF2Q99470 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.73■□□□□ 0.75
SDF2Q99470 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SDF2Q99470 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SDF2Q99470 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2Q99470 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2Q99470 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2Q99470 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2Q99470 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2Q99470 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SDF2Q99470 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.72■□□□□ 0.75
SDF2Q99470 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.72■□□□□ 0.75
SDF2Q99470 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SDF2Q99470 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2Q99470 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.72■□□□□ 0.75
SDF2Q99470 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2Q99470 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2Q99470 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDF2Q99470 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.71■□□□□ 0.75
SDF2Q99470 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SDF2Q99470 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SDF2Q99470 AC009237.3-201ENST00000393279 1427 ntBASIC19.71■□□□□ 0.75
SDF2Q99470 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDF2Q99470 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SDF2Q99470 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.71■□□□□ 0.75
SDF2Q99470 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDF2Q99470 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SDF2Q99470 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDF2Q99470 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDF2Q99470 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDF2Q99470 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDF2Q99470 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.7■□□□□ 0.74
SDF2Q99470 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.7■□□□□ 0.74
SDF2Q99470 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.7■□□□□ 0.74
SDF2Q99470 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.7■□□□□ 0.74
SDF2Q99470 AC142381.2-201ENST00000566120 298 ntBASIC19.7■□□□□ 0.74
SDF2Q99470 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.7■□□□□ 0.74
SDF2Q99470 AC005837.3-201ENST00000612163 286 ntBASIC19.7■□□□□ 0.74
SDF2Q99470 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.7■□□□□ 0.74
SDF2Q99470 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDF2Q99470 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.7■□□□□ 0.74
SDF2Q99470 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDF2Q99470 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
SDF2Q99470 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDF2Q99470 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.69■□□□□ 0.74
SDF2Q99470 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SDF2Q99470 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.69■□□□□ 0.74
SDF2Q99470 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.69■□□□□ 0.74
SDF2Q99470 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SDF2Q99470 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.69■□□□□ 0.74
SDF2Q99470 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 BX005040.4-201ENST00000637145 1518 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms