Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 Z98882.1-201ENST00000622160 2253 ntBASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 AC003102.1-202ENST00000563394 1796 ntBASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI3Q3KNW1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 AP006587.3-201ENST00000525742 1516 ntBASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 SUDS3P1-201ENST00000505831 966 ntBASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 AC104564.3-201ENST00000582367 638 ntBASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
SNAI3Q3KNW1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 AC105233.4-201ENST00000642045 216 ntBASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.49■□□□□ 0.55
SNAI3Q3KNW1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNAI3Q3KNW1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI3Q3KNW1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 MIR572-201ENST00000384983 95 ntBASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI3Q3KNW1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.46■□□□□ 0.54
SNAI3Q3KNW1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAI3Q3KNW1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms