Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 RPL9AYGL147C 576 nt5□□□□□ -1.61
PUF3Q07807 TAM41YGR046W 1158 nt5□□□□□ -1.61
PUF3Q07807 PRE9YGR135W 777 nt5□□□□□ -1.61
PUF3Q07807 HIT1YJR055W 495 nt5□□□□□ -1.61
PUF3Q07807 YLR050CYLR050C 486 nt5□□□□□ -1.61
PUF3Q07807 YMR031W-AYMR031W-A 327 nt5□□□□□ -1.61
PUF3Q07807 FOL3YMR113W 1284 nt5□□□□□ -1.61
PUF3Q07807 YNL035CYNL035C 1170 nt5□□□□□ -1.61
PUF3Q07807 SWS2YNL081C 432 nt5□□□□□ -1.61 RIP-Chip
PUF3Q07807 MCK1YNL307C 1128 nt5□□□□□ -1.61
PUF3Q07807 YOR053WYOR053W 342 nt5□□□□□ -1.61
PUF3Q07807 UBP16YPL072W 1500 nt5□□□□□ -1.61 RIP-Chip
PUF3Q07807 TPS3YMR261C 3165 nt5□□□□□ -1.61
PUF3Q07807 ARG4YHR018C 1392 nt5□□□□□ -1.61
PUF3Q07807 YKL075CYKL075C 1353 nt5□□□□□ -1.61
PUF3Q07807 FZO1YBR179C 2568 nt5□□□□□ -1.61 RIP-Chip
PUF3Q07807 CDC4YFL009W 2340 nt4.99□□□□□ -1.61
PUF3Q07807 TVP15YDR100W 432 nt4.99□□□□□ -1.61
PUF3Q07807 CHZ1YER030W 462 nt4.99□□□□□ -1.61
PUF3Q07807 YIL014C-AYIL014C-A 315 nt4.99□□□□□ -1.61
PUF3Q07807 YET1YKL065C 621 nt4.99□□□□□ -1.61
PUF3Q07807 PRX1YBL064C 786 nt4.99□□□□□ -1.61
PUF3Q07807 ICY2YPL250C 411 nt4.99□□□□□ -1.61
PUF3Q07807 YAP1802YGR241C 1707 nt4.99□□□□□ -1.61
PUF3Q07807 BUD27YFL023W 2391 nt4.99□□□□□ -1.61
PUF3Q07807 ERG11YHR007C 1593 nt4.99□□□□□ -1.61
PUF3Q07807 SEG2YKL105C 3399 nt4.99□□□□□ -1.61
PUF3Q07807 APN2YBL019W 1563 nt4.99□□□□□ -1.61
PUF3Q07807 FRS1YLR060W 1788 nt4.99□□□□□ -1.61
PUF3Q07807 YDL163WYDL163W 303 nt4.98□□□□□ -1.61
PUF3Q07807 GPI19YDR437W 423 nt4.98□□□□□ -1.61
PUF3Q07807 YGL007C-AYGL007C-A 87 nt4.98□□□□□ -1.61
PUF3Q07807 MAM33YIL070C 801 nt4.98□□□□□ -1.61 RIP-Chip
PUF3Q07807 UPS2YLR168C 693 nt4.98□□□□□ -1.61 RIP-Chip
PUF3Q07807 MSN1YOL116W 1149 nt4.98□□□□□ -1.61
PUF3Q07807 RPL19AYBR084C-A 570 nt4.98□□□□□ -1.61
PUF3Q07807 YBR126W-AYBR126W-A 207 nt4.98□□□□□ -1.61
PUF3Q07807 YBR285WYBR285W 435 nt4.98□□□□□ -1.61
PUF3Q07807 BUD7YOR299W 2241 nt4.98□□□□□ -1.61
PUF3Q07807 ERG4YGL012W 1422 nt4.97□□□□□ -1.61
PUF3Q07807 RAD28YDR030C 1521 nt4.97□□□□□ -1.61
PUF3Q07807 YJL206CYJL206C 2277 nt4.97□□□□□ -1.61
PUF3Q07807 YDL187CYDL187C 330 nt4.97□□□□□ -1.61
PUF3Q07807 DPP1YDR284C 870 nt4.97□□□□□ -1.61
PUF3Q07807 ECL1YGR146C 636 nt4.97□□□□□ -1.61
PUF3Q07807 VPS29YHR012W 849 nt4.97□□□□□ -1.61
PUF3Q07807 YLR125WYLR125W 411 nt4.97□□□□□ -1.61
PUF3Q07807 SOL1YNR034W 966 nt4.97□□□□□ -1.61
PUF3Q07807 COQ10YOL008W 624 nt4.97□□□□□ -1.61
PUF3Q07807 MCM16YPR046W 546 nt4.97□□□□□ -1.61
PUF3Q07807 APD1YBR151W 951 nt4.97□□□□□ -1.61
PUF3Q07807 SFI1YLL003W 2841 nt4.97□□□□□ -1.61
PUF3Q07807 SKG3YLR187W 3081 nt4.97□□□□□ -1.61
PUF3Q07807 THR4YCR053W 1545 nt4.97□□□□□ -1.61
PUF3Q07807 FMP30YPL103C 1407 nt4.97□□□□□ -1.61 RIP-Chip
PUF3Q07807 GAL80YML051W 1308 nt4.97□□□□□ -1.61
PUF3Q07807 GAL4YPL248C 2646 nt4.96□□□□□ -1.61
PUF3Q07807 MOT2YER068W 1764 nt4.96□□□□□ -1.61
PUF3Q07807 JIP5YPR169W 1479 nt4.96□□□□□ -1.62
PUF3Q07807 PRM8YGL053W 714 nt4.96□□□□□ -1.62
PUF3Q07807 LIF1YGL090W 1266 nt4.96□□□□□ -1.62
PUF3Q07807 YIL021C-AYIL021C-A 270 nt4.96□□□□□ -1.62
PUF3Q07807 APS1YLR170C 471 nt4.96□□□□□ -1.62
PUF3Q07807 PBI2YNL015W 228 nt4.96□□□□□ -1.62
PUF3Q07807 OCA2YNL056W 594 nt4.96□□□□□ -1.62
PUF3Q07807 YPR169W-AYPR169W-A 219 nt4.96□□□□□ -1.62
PUF3Q07807 YPR170W-BYPR170W-B 258 nt4.96□□□□□ -1.62
PUF3Q07807 GPR1YDL035C 2886 nt4.96□□□□□ -1.62
PUF3Q07807 CRT10YOL063C 2874 nt4.96□□□□□ -1.62
PUF3Q07807 YBR139WYBR139W 1527 nt4.96□□□□□ -1.62
PUF3Q07807 AFR1YDR085C 1863 nt4.96□□□□□ -1.62
PUF3Q07807 TDA3YHR009C 1572 nt4.95□□□□□ -1.62
PUF3Q07807 SPH1YLR313C 1593 nt4.95□□□□□ -1.62
PUF3Q07807 NUP116YMR047C 3342 nt4.95□□□□□ -1.62
PUF3Q07807 CPS1YJL172W 1731 nt4.95□□□□□ -1.62
PUF3Q07807 RVB1YDR190C 1392 nt4.95□□□□□ -1.62
PUF3Q07807 YDL071CYDL071C 375 nt4.95□□□□□ -1.62
PUF3Q07807 RGI1YER067W 486 nt4.95□□□□□ -1.62
PUF3Q07807 LSB1YGR136W 726 nt4.95□□□□□ -1.62
PUF3Q07807 ABM1YJR108W 372 nt4.95□□□□□ -1.62
PUF3Q07807 YKL118WYKL118W 312 nt4.95□□□□□ -1.62
PUF3Q07807 YAR019W-AYAR019W-A 333 nt4.95□□□□□ -1.62
PUF3Q07807 RRT16YNL105W 429 nt4.95□□□□□ -1.62
PUF3Q07807 PDX3YBR035C 687 nt4.95□□□□□ -1.62
PUF3Q07807 MSS18YPR134W 807 nt4.95□□□□□ -1.62
PUF3Q07807 CMD1YBR109C 444 nt4.95□□□□□ -1.62
PUF3Q07807 PRM7YDL039C 2097 nt4.95□□□□□ -1.62
PUF3Q07807 AXL2YIL140W 2472 nt4.95□□□□□ -1.62
PUF3Q07807 MNT2YGL257C 1677 nt4.94□□□□□ -1.62
PUF3Q07807 AAD3YCR107W 1092 nt4.94□□□□□ -1.62
PUF3Q07807 GCN4YEL009C 846 nt4.94□□□□□ -1.62
PUF3Q07807 RTT105YER104W 627 nt4.94□□□□□ -1.62
PUF3Q07807 ERP1YAR002C-A 660 nt4.94□□□□□ -1.62
PUF3Q07807 YBL006W-AYBL006W-A 150 nt4.94□□□□□ -1.62
PUF3Q07807 ADI1YMR009W 540 nt4.94□□□□□ -1.62
PUF3Q07807 YPR170CYPR170C 336 nt4.94□□□□□ -1.62
PUF3Q07807 ARP9YMR033W 1404 nt4.94□□□□□ -1.62
PUF3Q07807 RTK1YDL025C 1863 nt4.94□□□□□ -1.62
PUF3Q07807 SUP35YDR172W 2058 nt4.93□□□□□ -1.62
PUF3Q07807 FRE1YLR214W 2061 nt4.93□□□□□ -1.62 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms