Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC010542.4-201ENST00000563151 1910 ntBASIC18.45■□□□□ 0.54
SFTPBP07988 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SFTPBP07988 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.45■□□□□ 0.54
SFTPBP07988 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.45■□□□□ 0.54
SFTPBP07988 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SFTPBP07988 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SFTPBP07988 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SFTPBP07988 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.45■□□□□ 0.54
SFTPBP07988 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
SFTPBP07988 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.45■□□□□ 0.54
SFTPBP07988 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SFTPBP07988 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SFTPBP07988 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SFTPBP07988 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SFTPBP07988 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.44■□□□□ 0.54
SFTPBP07988 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.44■□□□□ 0.54
SFTPBP07988 AL031602.1-201ENST00000633169 911 ntBASIC18.44■□□□□ 0.54
SFTPBP07988 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SFTPBP07988 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SFTPBP07988 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SFTPBP07988 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SFTPBP07988 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SFTPBP07988 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SFTPBP07988 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SFTPBP07988 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.43■□□□□ 0.54
SFTPBP07988 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SFTPBP07988 AC142381.2-201ENST00000566120 298 ntBASIC18.43■□□□□ 0.54
SFTPBP07988 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.43■□□□□ 0.54
SFTPBP07988 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.43■□□□□ 0.54
SFTPBP07988 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SFTPBP07988 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SFTPBP07988 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SFTPBP07988 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SFTPBP07988 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SFTPBP07988 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.42■□□□□ 0.54
SFTPBP07988 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SFTPBP07988 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SFTPBP07988 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SFTPBP07988 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.42■□□□□ 0.54
SFTPBP07988 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.42■□□□□ 0.54
SFTPBP07988 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SFTPBP07988 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.42■□□□□ 0.54
SFTPBP07988 MIR3181-201ENST00000578512 73 ntBASIC18.42■□□□□ 0.54
SFTPBP07988 MIR4767-201ENST00000582827 78 ntBASIC18.42■□□□□ 0.54
SFTPBP07988 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SFTPBP07988 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.42■□□□□ 0.54
SFTPBP07988 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.42■□□□□ 0.54
SFTPBP07988 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.42■□□□□ 0.54
SFTPBP07988 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SFTPBP07988 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SFTPBP07988 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.41■□□□□ 0.54
SFTPBP07988 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.41■□□□□ 0.54
SFTPBP07988 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.41■□□□□ 0.54
SFTPBP07988 FAM99A-202ENST00000538190 1989 ntBASIC18.41■□□□□ 0.54
SFTPBP07988 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
SFTPBP07988 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.41■□□□□ 0.54
SFTPBP07988 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.41■□□□□ 0.54
SFTPBP07988 AL031432.3-201ENST00000607698 485 ntBASIC18.41■□□□□ 0.54
SFTPBP07988 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.41■□□□□ 0.54
SFTPBP07988 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SFTPBP07988 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.41■□□□□ 0.54
SFTPBP07988 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SFTPBP07988 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.4■□□□□ 0.54
SFTPBP07988 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.4■□□□□ 0.54
SFTPBP07988 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
SFTPBP07988 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.4■□□□□ 0.54
SFTPBP07988 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.4■□□□□ 0.54
SFTPBP07988 EDA-201ENST00000338901 1233 ntBASIC18.4■□□□□ 0.54
SFTPBP07988 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SFTPBP07988 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
SFTPBP07988 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.4■□□□□ 0.54
SFTPBP07988 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SFTPBP07988 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SFTPBP07988 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.4■□□□□ 0.54
SFTPBP07988 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SFTPBP07988 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SFTPBP07988 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SFTPBP07988 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SFTPBP07988 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
SFTPBP07988 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
SFTPBP07988 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SFTPBP07988 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SFTPBP07988 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.39■□□□□ 0.54
SFTPBP07988 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SFTPBP07988 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SFTPBP07988 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.39■□□□□ 0.53
SFTPBP07988 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SFTPBP07988 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SFTPBP07988 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SFTPBP07988 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.39■□□□□ 0.53
SFTPBP07988 AL355001.2-201ENST00000620617 1191 ntBASIC18.39■□□□□ 0.53
SFTPBP07988 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms