Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB5Q9Y5E4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB5Q9Y5E4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB5Q9Y5E4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHB5Q9Y5E4 AC073111.5-205ENST00000641717 521 ntBASIC22.58■■□□□ 1.21
PCDHB5Q9Y5E4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB5Q9Y5E4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB5Q9Y5E4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHB5Q9Y5E4 AC127496.7-201ENST00000625110 1798 ntBASIC22.58■■□□□ 1.2
PCDHB5Q9Y5E4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHB5Q9Y5E4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 AC138907.5-202ENST00000569484 235 ntBASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 AC011767.1-201ENST00000617410 1153 ntBASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB5Q9Y5E4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 CDCA4P2-201ENST00000441182 718 ntBASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB5Q9Y5E4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 AC010141.2-201ENST00000452426 721 ntBASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 EEF1DP3-203ENST00000566025 782 ntBASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 UBE2DNL-204ENST00000602536 740 ntBASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB5Q9Y5E4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 AC053503.5-201ENST00000601508 636 ntBASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 RAP2CP1-201ENST00000605103 478 ntBASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB5Q9Y5E4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 MFSD11-216ENST00000590393 1141 ntBASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB5Q9Y5E4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 AC080038.3-201ENST00000623346 1952 ntBASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 AC026185.1-201ENST00000445748 174 ntBASIC22.52■■□□□ 1.2
PCDHB5Q9Y5E4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms