Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.7■□□□□ 0.58
RHBDD3Q9Y3P4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.7■□□□□ 0.58
RHBDD3Q9Y3P4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDD3Q9Y3P4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.7■□□□□ 0.58
RHBDD3Q9Y3P4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.7■□□□□ 0.58
RHBDD3Q9Y3P4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDD3Q9Y3P4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDD3Q9Y3P4 AC005229.4-201ENST00000610085 2198 ntBASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 AC010525.1-201ENST00000585559 441 ntBASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RHBDD3Q9Y3P4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDD3Q9Y3P4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 AC011298.3-201ENST00000615796 283 ntBASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 AC136469.2-201ENST00000623944 1028 ntBASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHBDD3Q9Y3P4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHBDD3Q9Y3P4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 AC008406.3-201ENST00000620001 1374 ntBASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHBDD3Q9Y3P4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
RHBDD3Q9Y3P4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RHBDD3Q9Y3P4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RHBDD3Q9Y3P4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms