Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 RASA4CP-201ENST00000424092 1398 ntBASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS9D1Q9Y2B5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 AC091305.1-201ENST00000479476 895 ntBASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 SMUG1P1-201ENST00000590640 811 ntBASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.27■■□□□ 1
VPS9D1Q9Y2B5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS9D1Q9Y2B5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
VPS9D1Q9Y2B5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS9D1Q9Y2B5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 MIR939-201ENST00000401314 82 ntBASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 AL139246.5-201ENST00000606645 996 ntBASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS9D1Q9Y2B5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS9D1Q9Y2B5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 AF213884.3-201ENST00000563833 479 ntBASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 TSPY26P-201ENST00000476365 1326 ntBASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS9D1Q9Y2B5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VPS9D1Q9Y2B5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS9D1Q9Y2B5 AC009237.3-201ENST00000393279 1427 ntBASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS9D1Q9Y2B5 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms