Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 BX005040.4-201ENST00000637145 1518 ntBASIC18.66■□□□□ 0.58
CDH20Q9HBT6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 AL117328.2-201ENST00000624617 1940 ntBASIC18.66■□□□□ 0.58
CDH20Q9HBT6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH20Q9HBT6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 ECEL1P1-201ENST00000373592 1742 ntBASIC18.65■□□□□ 0.58
CDH20Q9HBT6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH20Q9HBT6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH20Q9HBT6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 AC092053.2-201ENST00000640557 1818 ntBASIC18.64■□□□□ 0.57
CDH20Q9HBT6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDH20Q9HBT6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 AC027612.3-201ENST00000413684 1047 ntBASIC18.63■□□□□ 0.57
CDH20Q9HBT6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 AC009237.3-201ENST00000393279 1427 ntBASIC18.63■□□□□ 0.57
CDH20Q9HBT6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH20Q9HBT6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH20Q9HBT6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms