Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71LQ8N9Z2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71LQ8N9Z2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71LQ8N9Z2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CCDC71LQ8N9Z2 AF106564.1-201ENST00000607058 2553 ntBASIC17.77■□□□□ 0.43
CCDC71LQ8N9Z2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71LQ8N9Z2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC71LQ8N9Z2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 AC009102.2-201ENST00000606772 1639 ntBASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC71LQ8N9Z2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 AC103724.3-201ENST00000564481 992 ntBASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC71LQ8N9Z2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 OXCT2P1-201ENST00000447263 1535 ntBASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC71LQ8N9Z2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 AC079089.2-201ENST00000531211 1277 ntBASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC71LQ8N9Z2 C17orf82-201ENST00000623772 1530 ntBASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 AC138932.1-201ENST00000534164 6830 ntBASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 AC021242.3-201ENST00000607598 1377 ntBASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 BX664725.1-201ENST00000438252 379 ntBASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC71LQ8N9Z2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms