Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 DBP10YDL031W 2988 nt4.05□□□□□ -1.76
RPN11P43588 PFK26YIL107C 2484 nt4.04□□□□□ -1.76
RPN11P43588 MIC60YKR016W 1623 nt4.04□□□□□ -1.76
RPN11P43588 RTS1YOR014W 2274 nt4.04□□□□□ -1.76
RPN11P43588 YCR007CYCR007C 720 nt4.04□□□□□ -1.76
RPN11P43588 DET1YDR051C 1005 nt4.04□□□□□ -1.76
RPN11P43588 PPH3YDR075W 927 nt4.04□□□□□ -1.76
RPN11P43588 YFL012WYFL012W 447 nt4.04□□□□□ -1.76
RPN11P43588 YFR045WYFR045W 930 nt4.04□□□□□ -1.76
RPN11P43588 YGL230CYGL230C 444 nt4.04□□□□□ -1.76
RPN11P43588 COS12YGL263W 1143 nt4.04□□□□□ -1.76
RPN11P43588 YHL026CYHL026C 948 nt4.04□□□□□ -1.76
RPN11P43588 DOG2YHR043C 741 nt4.04□□□□□ -1.76
RPN11P43588 SYC1YOR179C 567 nt4.04□□□□□ -1.76
RPN11P43588 DIM1YPL266W 957 nt4.04□□□□□ -1.76
RPN11P43588 snR189snR189 189 nt4.04□□□□□ -1.76
RPN11P43588 snR37snR37 386 nt4.04□□□□□ -1.76
RPN11P43588 GSM1YJL103C 1857 nt4.04□□□□□ -1.76
RPN11P43588 BCH1YMR237W 2175 nt4.04□□□□□ -1.76
RPN11P43588 SUP45YBR143C 1314 nt4.03□□□□□ -1.76
RPN11P43588 VPS25YJR102C 609 nt4.03□□□□□ -1.76
RPN11P43588 HUA2YOR284W 732 nt4.03□□□□□ -1.76
RPN11P43588 TPK2YPL203W 1143 nt4.03□□□□□ -1.76
RPN11P43588 POL3YDL102W 3294 nt4.03□□□□□ -1.76
RPN11P43588 GEM1YAL048C 1989 nt4.03□□□□□ -1.76
RPN11P43588 HOT1YMR172W 2160 nt4.03□□□□□ -1.76
RPN11P43588 TGL3YMR313C 1929 nt4.03□□□□□ -1.76
RPN11P43588 THI20YOL055C 1656 nt4.03□□□□□ -1.76
RPN11P43588 VBA2YBR293W 1425 nt4.03□□□□□ -1.76
RPN11P43588 HCA4YJL033W 2313 nt4.03□□□□□ -1.77
RPN11P43588 UGA3YDL170W 1587 nt4.02□□□□□ -1.77
RPN11P43588 SMP3YOR149C 1551 nt4.02□□□□□ -1.77
RPN11P43588 ECM22YLR228C 2445 nt4.02□□□□□ -1.77
RPN11P43588 SPS2YDR522C 1509 nt4.02□□□□□ -1.77
RPN11P43588 PUT2YHR037W 1728 nt4.02□□□□□ -1.77
RPN11P43588 COG7YGL005C 840 nt4.02□□□□□ -1.77
RPN11P43588 VMA7YGR020C 357 nt4.02□□□□□ -1.77
RPN11P43588 YIR023C-AYIR023C-A 324 nt4.02□□□□□ -1.77
RPN11P43588 YKR070WYKR070W 1059 nt4.02□□□□□ -1.77
RPN11P43588 YMR087WYMR087W 855 nt4.02□□□□□ -1.77
RPN11P43588 RIM11YMR139W 1113 nt4.02□□□□□ -1.77
RPN11P43588 PEX27YOR193W 1131 nt4.02□□□□□ -1.77
RPN11P43588 MCM16YPR046W 546 nt4.02□□□□□ -1.77
RPN11P43588 YBR116CYBR116C 528 nt4.02□□□□□ -1.77
RPN11P43588 YTA7YGR270W 4140 nt4.02□□□□□ -1.77
RPN11P43588 SPT14YPL175W 1359 nt4.02□□□□□ -1.77
RPN11P43588 FAD1YDL045C 921 nt4.01□□□□□ -1.77
RPN11P43588 MIG3YER028C 1185 nt4.01□□□□□ -1.77
RPN11P43588 DCV1YFR012W 609 nt4.01□□□□□ -1.77
RPN11P43588 EST3YIL009C-A 546 nt4.01□□□□□ -1.77
RPN11P43588 MET14YKL001C 609 nt4.01□□□□□ -1.77
RPN11P43588 ECM16YMR128W 3804 nt4.01□□□□□ -1.77
RPN11P43588 GDE1YPL110C 3672 nt4.01□□□□□ -1.77
RPN11P43588 PDR5YOR153W 4536 nt4.01□□□□□ -1.77
RPN11P43588 AIM14YGL160W 1713 nt4.01□□□□□ -1.77
RPN11P43588 TAF12YDR145W 1620 nt4□□□□□ -1.77
RPN11P43588 SSE2YBR169C 2082 nt4□□□□□ -1.77
RPN11P43588 YJL156W-AYJL156W-A 222 nt4□□□□□ -1.77
RPN11P43588 SMD2YLR275W 333 nt4□□□□□ -1.77
RPN11P43588 TEM1YML064C 738 nt4□□□□□ -1.77
RPN11P43588 GOT1YMR292W 417 nt4□□□□□ -1.77
RPN11P43588 YNL320WYNL320W 855 nt4□□□□□ -1.77
RPN11P43588 HPA2YPR193C 471 nt4□□□□□ -1.77
RPN11P43588 NTO1YPR031W 2247 nt4□□□□□ -1.77
RPN11P43588 EPL1YFL024C 2499 nt4□□□□□ -1.77
RPN11P43588 SAT4YCR008W 1812 nt4□□□□□ -1.77
RPN11P43588 TAF7YMR227C 1773 nt3.99□□□□□ -1.77
RPN11P43588 OPT2YPR194C 2634 nt3.99□□□□□ -1.77
RPN11P43588 HSP42YDR171W 1128 nt3.99□□□□□ -1.77
RPN11P43588 TLG1YDR468C 675 nt3.99□□□□□ -1.77
RPN11P43588 IZH1YDR492W 951 nt3.99□□□□□ -1.77
RPN11P43588 MEI4YER044C-A 1227 nt3.99□□□□□ -1.77
RPN11P43588 CAB2YIL083C 1098 nt3.99□□□□□ -1.77
RPN11P43588 FMC1YIL098C 468 nt3.99□□□□□ -1.77
RPN11P43588 GPI14YJR013W 1212 nt3.99□□□□□ -1.77
RPN11P43588 AIM25YJR100C 984 nt3.99□□□□□ -1.77
RPN11P43588 YAL065CYAL065C 387 nt3.99□□□□□ -1.77
RPN11P43588 YLR339CYLR339C 552 nt3.99□□□□□ -1.77
RPN11P43588 YMR099CYMR099C 894 nt3.99□□□□□ -1.77
RPN11P43588 YBL039W-BYBL039W-B 180 nt3.99□□□□□ -1.77
RPN11P43588 RCE1YMR274C 948 nt3.99□□□□□ -1.77
RPN11P43588 GPI12YMR281W 915 nt3.99□□□□□ -1.77
RPN11P43588 RPB8YOR224C 441 nt3.99□□□□□ -1.77
RPN11P43588 PRM4YPL156C 855 nt3.99□□□□□ -1.77
RPN11P43588 YAR1YPL239W 603 nt3.99□□□□□ -1.77
RPN11P43588 MRPL27YBR282W 441 nt3.99□□□□□ -1.77
RPN11P43588 RPA135YPR010C 3612 nt3.99□□□□□ -1.77
RPN11P43588 IZH3YLR023C 1632 nt3.99□□□□□ -1.77
RPN11P43588 ACA1YER045C 1470 nt3.98□□□□□ -1.77
RPN11P43588 GLO3YER122C 1482 nt3.98□□□□□ -1.77
RPN11P43588 YDR535CYDR535C 501 nt3.98□□□□□ -1.77
RPN11P43588 YGL117WYGL117W 798 nt3.98□□□□□ -1.77
RPN11P43588 CFD1YIL003W 882 nt3.98□□□□□ -1.77
RPN11P43588 SAS5YOR213C 747 nt3.98□□□□□ -1.77
RPN11P43588 YOR263CYOR263C 408 nt3.98□□□□□ -1.77
RPN11P43588 YOR283WYOR283W 693 nt3.98□□□□□ -1.77
RPN11P43588 SRL4YPL033C 846 nt3.98□□□□□ -1.77
RPN11P43588 USV1YPL230W 1176 nt3.98□□□□□ -1.77
RPN11P43588 NCE102YPR149W 522 nt3.98□□□□□ -1.77
RPN11P43588 MIS1YBR084W 2928 nt3.98□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 44.9 ms