Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YIL068W-AYIL068W-A 384 nt5.1□□□□□ -1.59
MSH3P25336 TFA1YKL028W 1449 nt5.1□□□□□ -1.59
MSH3P25336 YKL063CYKL063C 504 nt5.1□□□□□ -1.59
MSH3P25336 YKL075CYKL075C 1353 nt5.1□□□□□ -1.59
MSH3P25336 MED11YMR112C 396 nt5.1□□□□□ -1.59
MSH3P25336 MRPL44YMR225C 297 nt5.1□□□□□ -1.59
MSH3P25336 YMR254CYMR254C 309 nt5.1□□□□□ -1.59
MSH3P25336 JJJ1YNL227C 1773 nt5.1□□□□□ -1.59
MSH3P25336 MRM1YOR201C 1239 nt5.1□□□□□ -1.59
MSH3P25336 MRPL51YPR100W 423 nt5.1□□□□□ -1.59
MSH3P25336 TGL4YKR089C 2733 nt5.1□□□□□ -1.59
MSH3P25336 NTH1YDR001C 2256 nt5.09□□□□□ -1.59
MSH3P25336 BUD7YOR299W 2241 nt5.09□□□□□ -1.59
MSH3P25336 GSY1YFR015C 2127 nt5.09□□□□□ -1.59
MSH3P25336 YVC1YOR087W 2028 nt5.09□□□□□ -1.59
MSH3P25336 MRH4YGL064C 1686 nt5.09□□□□□ -1.59
MSH3P25336 CHK1YBR274W 1584 nt5.09□□□□□ -1.59
MSH3P25336 MIG3YER028C 1185 nt5.09□□□□□ -1.59
MSH3P25336 YIP1YGR172C 747 nt5.09□□□□□ -1.59
MSH3P25336 LRP1YHR081W 555 nt5.09□□□□□ -1.59
MSH3P25336 SNX4YJL036W 1272 nt5.09□□□□□ -1.59
MSH3P25336 YNL058CYNL058C 951 nt5.09□□□□□ -1.59
MSH3P25336 YNL109WYNL109W 546 nt5.09□□□□□ -1.59
MSH3P25336 ECM23YPL021W 564 nt5.09□□□□□ -1.59
MSH3P25336 YPR169W-AYPR169W-A 219 nt5.09□□□□□ -1.59
MSH3P25336 YPR170W-BYPR170W-B 258 nt5.09□□□□□ -1.59
MSH3P25336 DHR2YKL078W 2208 nt5.09□□□□□ -1.59
MSH3P25336 ASM4YDL088C 1587 nt5.08□□□□□ -1.6
MSH3P25336 OLE1YGL055W 1533 nt5.08□□□□□ -1.6
MSH3P25336 TDA11YHR159W 1515 nt5.08□□□□□ -1.6
MSH3P25336 YBL005W-AYBL005W-A 1323 nt5.08□□□□□ -1.6
MSH3P25336 GEM1YAL048C 1989 nt5.08□□□□□ -1.6
MSH3P25336 snR9snR9 187 nt5.08□□□□□ -1.6
MSH3P25336 AGA2YGL032C 264 nt5.08□□□□□ -1.6
MSH3P25336 ARO2YGL148W 1131 nt5.08□□□□□ -1.6
MSH3P25336 YJR011CYJR011C 786 nt5.08□□□□□ -1.6
MSH3P25336 IRC19YLL033W 693 nt5.08□□□□□ -1.6
MSH3P25336 YML053CYML053C 639 nt5.08□□□□□ -1.6
MSH3P25336 CAF20YOR276W 486 nt5.08□□□□□ -1.6
MSH3P25336 DSS4YPR017C 432 nt5.08□□□□□ -1.6
MSH3P25336 ADF1YCL058W-A 342 nt5.08□□□□□ -1.6
MSH3P25336 CDC48YDL126C 2508 nt5.08□□□□□ -1.6
MSH3P25336 MEF2YJL102W 2460 nt5.07□□□□□ -1.6
MSH3P25336 APP1YNL094W 1764 nt5.07□□□□□ -1.6
MSH3P25336 KGD1YIL125W 3045 nt5.07□□□□□ -1.6
MSH3P25336 HNT2YDR305C 654 nt5.07□□□□□ -1.6
MSH3P25336 YGR018CYGR018C 330 nt5.07□□□□□ -1.6
MSH3P25336 YHR213WYHR213W 597 nt5.07□□□□□ -1.6
MSH3P25336 YAR062WYAR062W 597 nt5.07□□□□□ -1.6
MSH3P25336 RPB5YBR154C 648 nt5.07□□□□□ -1.6
MSH3P25336 KAR4YCL055W 1008 nt5.07□□□□□ -1.6
MSH3P25336 RKM2YDR198C 1440 nt5.06□□□□□ -1.6
MSH3P25336 CDC5YMR001C 2118 nt5.06□□□□□ -1.6
MSH3P25336 PDR15YDR406W 4590 nt5.06□□□□□ -1.6
MSH3P25336 LTV1YKL143W 1392 nt5.06□□□□□ -1.6
MSH3P25336 AI4Q0065 1671 nt5.06□□□□□ -1.6
MSH3P25336 RTS1YOR014W 2274 nt5.06□□□□□ -1.6
MSH3P25336 FIN1YDR130C 876 nt5.06□□□□□ -1.6
MSH3P25336 RPL17AYKL180W 555 nt5.06□□□□□ -1.6
MSH3P25336 ERP1YAR002C-A 660 nt5.06□□□□□ -1.6
MSH3P25336 YLR400WYLR400W 474 nt5.06□□□□□ -1.6
MSH3P25336 YMR001C-AYMR001C-A 231 nt5.06□□□□□ -1.6
MSH3P25336 DUN1YDL101C 1542 nt5.06□□□□□ -1.6
MSH3P25336 GAS4YOL132W 1416 nt5.06□□□□□ -1.6
MSH3P25336 SRP1YNL189W 1629 nt5.05□□□□□ -1.6
MSH3P25336 CUE3YGL110C 1875 nt5.05□□□□□ -1.6
MSH3P25336 TRS85YDR108W 2097 nt5.05□□□□□ -1.6
MSH3P25336 SLX9YGR081C 633 nt5.05□□□□□ -1.6
MSH3P25336 APS1YLR170C 471 nt5.05□□□□□ -1.6
MSH3P25336 MRPL3YMR024W 1173 nt5.05□□□□□ -1.6
MSH3P25336 UBX4YMR067C 1251 nt5.05□□□□□ -1.6
MSH3P25336 YNL296WYNL296W 315 nt5.05□□□□□ -1.6
MSH3P25336 INA17YPL099C 549 nt5.05□□□□□ -1.6
MSH3P25336 ARC40YBR234C 1155 nt5.05□□□□□ -1.6
MSH3P25336 LAS21YJL062W 2493 nt5.04□□□□□ -1.6
MSH3P25336 snR5snR5 204 nt5.04□□□□□ -1.6
MSH3P25336 YDL032WYDL032W 312 nt5.04□□□□□ -1.6
MSH3P25336 MSW1YDR268W 1140 nt5.04□□□□□ -1.6
MSH3P25336 YGR161W-CYGR161W-C 279 nt5.04□□□□□ -1.6
MSH3P25336 tX(XXX)DtX(XXX)D 100 nt5.04□□□□□ -1.6
MSH3P25336 YAL056C-AYAL056C-A 351 nt5.04□□□□□ -1.6
MSH3P25336 YBL071CYBL071C 309 nt5.04□□□□□ -1.6
MSH3P25336 CUR1YPR158W 759 nt5.04□□□□□ -1.6
MSH3P25336 GSM1YJL103C 1857 nt5.04□□□□□ -1.6
MSH3P25336 IZH3YLR023C 1632 nt5.04□□□□□ -1.6
MSH3P25336 PMT4YJR143C 2289 nt5.03□□□□□ -1.6
MSH3P25336 ESA1YOR244W 1338 nt5.03□□□□□ -1.6
MSH3P25336 ZPR1YGR211W 1461 nt5.03□□□□□ -1.6
MSH3P25336 VAC7YNL054W 3498 nt5.03□□□□□ -1.6
MSH3P25336 YDR545C-AYDR545C-A 480 nt5.03□□□□□ -1.6
MSH3P25336 YEL077W-AYEL077W-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YER190C-BYER190C-B 483 nt5.03□□□□□ -1.6
MSH3P25336 YFL068WYFL068W 483 nt5.03□□□□□ -1.6
MSH3P25336 YGR296C-BYGR296C-B 483 nt5.03□□□□□ -1.6
MSH3P25336 YHL050W-AYHL050W-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YHR219C-AYHR219C-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YIL029CYIL029C 429 nt5.03□□□□□ -1.6
MSH3P25336 YIL177W-AYIL177W-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YJL225W-AYJL225W-A 483 nt5.03□□□□□ -1.6
MSH3P25336 RPC37YKR025W 849 nt5.03□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 43.3 ms