Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHAC2Q9Y5I4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25.76■■□□□ 1.71
PCDHAC2Q9Y5I4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHAC2Q9Y5I4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHAC2Q9Y5I4 SLC29A4P1-201ENST00000398760 971 ntBASIC25.74■■□□□ 1.71
PCDHAC2Q9Y5I4 AF201337.1-201ENST00000520239 748 ntBASIC25.74■■□□□ 1.71
PCDHAC2Q9Y5I4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.74■■□□□ 1.71
PCDHAC2Q9Y5I4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.74■■□□□ 1.71
PCDHAC2Q9Y5I4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHAC2Q9Y5I4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHAC2Q9Y5I4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHAC2Q9Y5I4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHAC2Q9Y5I4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHAC2Q9Y5I4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHAC2Q9Y5I4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHAC2Q9Y5I4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHAC2Q9Y5I4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHAC2Q9Y5I4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHAC2Q9Y5I4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHAC2Q9Y5I4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHAC2Q9Y5I4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHAC2Q9Y5I4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
PCDHAC2Q9Y5I4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHAC2Q9Y5I4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHAC2Q9Y5I4 OR7E47P-201ENST00000546390 1422 ntBASIC25.71■■□□□ 1.71
PCDHAC2Q9Y5I4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHAC2Q9Y5I4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.7■■□□□ 1.71
PCDHAC2Q9Y5I4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 AC133552.2-202ENST00000575694 574 ntBASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
PCDHAC2Q9Y5I4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 EEF1DP3-203ENST00000566025 782 ntBASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 AC068338.2-201ENST00000563278 1430 ntBASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PCDHAC2Q9Y5I4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHAC2Q9Y5I4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHAC2Q9Y5I4 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHAC2Q9Y5I4 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.68■■□□□ 1.7
PCDHAC2Q9Y5I4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHAC2Q9Y5I4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PCDHAC2Q9Y5I4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 KRT18P20-201ENST00000548986 1279 ntBASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 AP006587.3-201ENST00000525742 1516 ntBASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHAC2Q9Y5I4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 TERF1P5-201ENST00000477545 1207 ntBASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms