Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 SLC25A24-204ENST00000569674 2357 ntBASIC22.95■■□□□ 1.26
PCDHA13Q9Y5I0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 AC104564.3-201ENST00000582367 638 ntBASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA13Q9Y5I0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA13Q9Y5I0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 AC099791.2-201ENST00000605725 427 ntBASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA13Q9Y5I0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 AC073130.3-201ENST00000624389 2278 ntBASIC22.91■■□□□ 1.26
PCDHA13Q9Y5I0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA13Q9Y5I0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.89■■□□□ 1.26
PCDHA13Q9Y5I0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA13Q9Y5I0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 AC068587.7-201ENST00000641602 218 ntBASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDHA13Q9Y5I0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDHA13Q9Y5I0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms