Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 AC242852.2-201ENST00000615738 1807 ntBASIC18.72■□□□□ 0.59
CDH20Q9HBT6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH20Q9HBT6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 AL034346.1-201ENST00000568244 1277 ntBASIC18.71■□□□□ 0.59
CDH20Q9HBT6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH20Q9HBT6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.71■□□□□ 0.58
CDH20Q9HBT6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 MIR6084-201ENST00000622012 110 ntBASIC18.7■□□□□ 0.58
CDH20Q9HBT6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH20Q9HBT6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH20Q9HBT6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.68■□□□□ 0.58
CDH20Q9HBT6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 AP004607.7-201ENST00000527152 1677 ntBASIC18.68■□□□□ 0.58
CDH20Q9HBT6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH20Q9HBT6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.67■□□□□ 0.58
CDH20Q9HBT6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH20Q9HBT6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms