Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 PPP1R14BP2-201ENST00000426284 444 ntBASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC098590.1-201ENST00000468126 897 ntBASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 SLC7A5P1-201ENST00000568957 537 ntBASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 ITM2C-210ENST00000620962 501 ntBASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 AP004607.7-201ENST00000527152 1677 ntBASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 LINC00526-201ENST00000581067 1875 ntBASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 TERF1P5-201ENST00000477545 1207 ntBASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC016405.3-201ENST00000607710 860 ntBASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC083880.1-201ENST00000608266 535 ntBASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC11.25□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 KRT18P20-201ENST00000548986 1279 ntBASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 EEF1DP3-203ENST00000566025 782 ntBASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 MKRN4P-201ENST00000444706 1521 ntBASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP4-1Q9BYQ7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 LINC01960-201ENST00000563759 1884 ntBASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 MIR4758-201ENST00000577688 71 ntBASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC013268.1-206ENST00000638368 961 ntBASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC112229.1-201ENST00000639295 961 ntBASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP4-1Q9BYQ7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 KRT18P29-201ENST00000397031 1267 ntBASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms