Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.83■□□□□ 0.93
SNAP47Q5SQN1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.83■□□□□ 0.92
SNAP47Q5SQN1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNAP47Q5SQN1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNAP47Q5SQN1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
SNAP47Q5SQN1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 AC080038.1-201ENST00000611274 1154 ntBASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAP47Q5SQN1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 KRT19P1-201ENST00000405746 1186 ntBASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SNAP47Q5SQN1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNAP47Q5SQN1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 AC005224.4-201ENST00000583262 1652 ntBASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 AC006015.1-201ENST00000429970 570 ntBASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.78■□□□□ 0.92
SNAP47Q5SQN1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SNAP47Q5SQN1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.77■□□□□ 0.92
SNAP47Q5SQN1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNAP47Q5SQN1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SNAP47Q5SQN1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNAP47Q5SQN1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.77■□□□□ 0.92
SNAP47Q5SQN1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 AC079089.2-201ENST00000531211 1277 ntBASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 AC009237.3-201ENST00000393279 1427 ntBASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAP47Q5SQN1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms