Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.46■■□□□ 1.99
COL15A1P39059 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL15A1P39059 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.46■■□□□ 1.99
COL15A1P39059 AC069152.1-201ENST00000438030 544 ntBASIC27.46■■□□□ 1.99
COL15A1P39059 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.46■■□□□ 1.99
COL15A1P39059 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
COL15A1P39059 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC27.45■■□□□ 1.98
COL15A1P39059 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.45■■□□□ 1.98
COL15A1P39059 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
COL15A1P39059 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
COL15A1P39059 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL15A1P39059 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL15A1P39059 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.44■■□□□ 1.98
COL15A1P39059 AC138907.5-202ENST00000569484 235 ntBASIC27.44■■□□□ 1.98
COL15A1P39059 AC010536.3-201ENST00000620306 533 ntBASIC27.44■■□□□ 1.98
COL15A1P39059 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
COL15A1P39059 AC066615.1-201ENST00000640911 628 ntBASIC27.44■■□□□ 1.98
COL15A1P39059 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL15A1P39059 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
COL15A1P39059 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL15A1P39059 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL15A1P39059 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.42■■□□□ 1.98
COL15A1P39059 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL15A1P39059 AF201337.1-201ENST00000520239 748 ntBASIC27.42■■□□□ 1.98
COL15A1P39059 RGMA-211ENST00000557420 989 ntTSL 3 BASIC27.42■■□□□ 1.98
COL15A1P39059 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL15A1P39059 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL15A1P39059 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL15A1P39059 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL15A1P39059 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
COL15A1P39059 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL15A1P39059 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL15A1P39059 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL15A1P39059 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
COL15A1P39059 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
COL15A1P39059 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.41■■□□□ 1.98
COL15A1P39059 AC133552.2-202ENST00000575694 574 ntBASIC27.41■■□□□ 1.98
COL15A1P39059 LINC01960-201ENST00000563759 1884 ntBASIC27.41■■□□□ 1.98
COL15A1P39059 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL15A1P39059 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL15A1P39059 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.41■■□□□ 1.98
COL15A1P39059 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.4■■□□□ 1.98
COL15A1P39059 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.4■■□□□ 1.98
COL15A1P39059 AC079089.2-201ENST00000531211 1277 ntBASIC27.4■■□□□ 1.98
COL15A1P39059 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL15A1P39059 GCA-201ENST00000233612 1694 ntTSL 2 BASIC27.4■■□□□ 1.98
COL15A1P39059 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL15A1P39059 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL15A1P39059 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL15A1P39059 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
COL15A1P39059 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.39■■□□□ 1.98
COL15A1P39059 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL15A1P39059 KRT18P20-201ENST00000548986 1279 ntBASIC27.39■■□□□ 1.98
COL15A1P39059 AC105036.2-201ENST00000569468 176 ntBASIC27.39■■□□□ 1.98
COL15A1P39059 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.39■■□□□ 1.98
COL15A1P39059 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL15A1P39059 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.39■■□□□ 1.97
COL15A1P39059 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.39■■□□□ 1.97
COL15A1P39059 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
COL15A1P39059 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL15A1P39059 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
COL15A1P39059 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL15A1P39059 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
COL15A1P39059 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.38■■□□□ 1.97
COL15A1P39059 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.38■■□□□ 1.97
COL15A1P39059 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.38■■□□□ 1.97
COL15A1P39059 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL15A1P39059 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL15A1P39059 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.38■■□□□ 1.97
COL15A1P39059 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL15A1P39059 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
COL15A1P39059 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.37■■□□□ 1.97
COL15A1P39059 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL15A1P39059 AC073210.2-201ENST00000430369 194 ntBASIC27.37■■□□□ 1.97
COL15A1P39059 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.37■■□□□ 1.97
COL15A1P39059 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.37■■□□□ 1.97
COL15A1P39059 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL15A1P39059 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL15A1P39059 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL15A1P39059 AP004607.7-201ENST00000527152 1677 ntBASIC27.37■■□□□ 1.97
COL15A1P39059 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL15A1P39059 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC27.36■■□□□ 1.97
COL15A1P39059 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
COL15A1P39059 AC133041.1-202ENST00000642053 222 ntBASIC27.36■■□□□ 1.97
COL15A1P39059 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.36■■□□□ 1.97
COL15A1P39059 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.36■■□□□ 1.97
COL15A1P39059 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL15A1P39059 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL15A1P39059 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL15A1P39059 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.35■■□□□ 1.97
COL15A1P39059 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL15A1P39059 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL15A1P39059 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL15A1P39059 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.35■■□□□ 1.97
COL15A1P39059 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.35■■□□□ 1.97
COL15A1P39059 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL15A1P39059 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
COL15A1P39059 CYP2T1P-201ENST00000432607 1285 ntBASIC27.35■■□□□ 1.97
COL15A1P39059 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL15A1P39059 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms