Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DUX1O43812 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DUX1O43812 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DUX1O43812 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DUX1O43812 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DUX1O43812 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DUX1O43812 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.62■□□□□ 0.89
DUX1O43812 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.62■□□□□ 0.89
DUX1O43812 AC010141.2-201ENST00000452426 721 ntBASIC20.62■□□□□ 0.89
DUX1O43812 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.62■□□□□ 0.89
DUX1O43812 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.62■□□□□ 0.89
DUX1O43812 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
DUX1O43812 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DUX1O43812 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.62■□□□□ 0.89
DUX1O43812 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.62■□□□□ 0.89
DUX1O43812 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DUX1O43812 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.62■□□□□ 0.89
DUX1O43812 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DUX1O43812 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DUX1O43812 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DUX1O43812 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
DUX1O43812 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
DUX1O43812 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.61■□□□□ 0.89
DUX1O43812 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DUX1O43812 MIR663A-201ENST00000385250 93 ntBASIC20.61■□□□□ 0.89
DUX1O43812 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.61■□□□□ 0.89
DUX1O43812 AC138907.5-202ENST00000569484 235 ntBASIC20.61■□□□□ 0.89
DUX1O43812 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.61■□□□□ 0.89
DUX1O43812 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.61■□□□□ 0.89
DUX1O43812 MYCNOS-205ENST00000641950 531 ntBASIC20.61■□□□□ 0.89
DUX1O43812 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.61■□□□□ 0.89
DUX1O43812 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
DUX1O43812 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
DUX1O43812 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
DUX1O43812 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.61■□□□□ 0.89
DUX1O43812 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DUX1O43812 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
DUX1O43812 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 CROCCP5-201ENST00000436658 830 ntBASIC20.6■□□□□ 0.89
DUX1O43812 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.6■□□□□ 0.89
DUX1O43812 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DUX1O43812 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.6■□□□□ 0.89
DUX1O43812 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.6■□□□□ 0.89
DUX1O43812 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.6■□□□□ 0.89
DUX1O43812 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUX1O43812 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX1O43812 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX1O43812 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX1O43812 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.59■□□□□ 0.89
DUX1O43812 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.59■□□□□ 0.89
DUX1O43812 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX1O43812 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DUX1O43812 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.59■□□□□ 0.89
DUX1O43812 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.59■□□□□ 0.89
DUX1O43812 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.59■□□□□ 0.89
DUX1O43812 AC231657.2-201ENST00000624556 255 ntBASIC20.59■□□□□ 0.89
DUX1O43812 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX1O43812 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX1O43812 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DUX1O43812 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DUX1O43812 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DUX1O43812 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
DUX1O43812 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DUX1O43812 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.58■□□□□ 0.89
DUX1O43812 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DUX1O43812 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DUX1O43812 KRT18P20-201ENST00000548986 1279 ntBASIC20.58■□□□□ 0.89
DUX1O43812 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DUX1O43812 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.58■□□□□ 0.89
DUX1O43812 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
DUX1O43812 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.58■□□□□ 0.88
DUX1O43812 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DUX1O43812 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.58■□□□□ 0.88
DUX1O43812 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DUX1O43812 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.58■□□□□ 0.88
DUX1O43812 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
DUX1O43812 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DUX1O43812 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DUX1O43812 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DUX1O43812 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.57■□□□□ 0.88
DUX1O43812 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DUX1O43812 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DUX1O43812 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms