Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SDF2Q99470 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDF2Q99470 FBXW4P1-201ENST00000426721 2239 ntBASIC20.02■□□□□ 0.79
SDF2Q99470 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDF2Q99470 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SDF2Q99470 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.01■□□□□ 0.79
SDF2Q99470 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.01■□□□□ 0.79
SDF2Q99470 BX842568.3-201ENST00000418104 571 ntBASIC20.01■□□□□ 0.79
SDF2Q99470 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.01■□□□□ 0.79
SDF2Q99470 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SDF2Q99470 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDF2Q99470 FAM99A-202ENST00000538190 1989 ntBASIC20.01■□□□□ 0.79
SDF2Q99470 AC135279.3-201ENST00000610945 1311 ntBASIC20.01■□□□□ 0.79
SDF2Q99470 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20■□□□□ 0.79
SDF2Q99470 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SDF2Q99470 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20■□□□□ 0.79
SDF2Q99470 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20■□□□□ 0.79
SDF2Q99470 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20■□□□□ 0.79
SDF2Q99470 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20■□□□□ 0.79
SDF2Q99470 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SDF2Q99470 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.99■□□□□ 0.79
SDF2Q99470 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SDF2Q99470 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.99■□□□□ 0.79
SDF2Q99470 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SDF2Q99470 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SDF2Q99470 AC096631.2-201ENST00000436136 790 ntBASIC19.99■□□□□ 0.79
SDF2Q99470 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.99■□□□□ 0.79
SDF2Q99470 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SDF2Q99470 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDF2Q99470 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SDF2Q99470 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SDF2Q99470 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SDF2Q99470 AC010542.4-201ENST00000563151 1910 ntBASIC19.98■□□□□ 0.79
SDF2Q99470 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
SDF2Q99470 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SDF2Q99470 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.98■□□□□ 0.79
SDF2Q99470 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SDF2Q99470 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SDF2Q99470 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SDF2Q99470 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.98■□□□□ 0.79
SDF2Q99470 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.97■□□□□ 0.79
SDF2Q99470 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SDF2Q99470 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SDF2Q99470 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SDF2Q99470 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.97■□□□□ 0.79
SDF2Q99470 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
SDF2Q99470 AC233992.3-201ENST00000607491 485 ntBASIC19.97■□□□□ 0.79
SDF2Q99470 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.97■□□□□ 0.79
SDF2Q99470 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SDF2Q99470 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SDF2Q99470 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SDF2Q99470 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.97■□□□□ 0.79
SDF2Q99470 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
SDF2Q99470 CLDN5-201ENST00000403084 2357 ntBASIC19.97■□□□□ 0.79
SDF2Q99470 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SDF2Q99470 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SDF2Q99470 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.96■□□□□ 0.79
SDF2Q99470 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.96■□□□□ 0.79
SDF2Q99470 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SDF2Q99470 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDF2Q99470 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDF2Q99470 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.96■□□□□ 0.79
SDF2Q99470 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.96■□□□□ 0.79
SDF2Q99470 PBX2P1-201ENST00000493219 1291 ntBASIC19.96■□□□□ 0.79
SDF2Q99470 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.96■□□□□ 0.79
SDF2Q99470 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.96■□□□□ 0.79
SDF2Q99470 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDF2Q99470 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDF2Q99470 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SDF2Q99470 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SDF2Q99470 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SDF2Q99470 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SDF2Q99470 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms