Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
FAM78BQ5VT40 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.08■□□□□ 0.32
FAM78BQ5VT40 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FAM78BQ5VT40 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FAM78BQ5VT40 LINC01960-201ENST00000563759 1884 ntBASIC17.07■□□□□ 0.32
FAM78BQ5VT40 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 AC103834.1-201ENST00000520383 144 ntBASIC17.07■□□□□ 0.32
FAM78BQ5VT40 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM78BQ5VT40 LINC01529-204ENST00000636474 1715 ntBASIC17.07■□□□□ 0.32
FAM78BQ5VT40 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM78BQ5VT40 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 AC005229.4-201ENST00000610085 2198 ntBASIC17.05■□□□□ 0.32
FAM78BQ5VT40 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM78BQ5VT40 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM78BQ5VT40 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 AC103724.3-201ENST00000564481 992 ntBASIC17.03■□□□□ 0.32
FAM78BQ5VT40 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM78BQ5VT40 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FAM78BQ5VT40 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.02■□□□□ 0.31
FAM78BQ5VT40 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
FAM78BQ5VT40 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FAM78BQ5VT40 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
FAM78BQ5VT40 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FAM78BQ5VT40 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FAM78BQ5VT40 AC244015.2-201ENST00000616358 1861 ntBASIC17.01■□□□□ 0.31
FAM78BQ5VT40 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
FAM78BQ5VT40 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FAM78BQ5VT40 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FAM78BQ5VT40 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FAM78BQ5VT40 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.01■□□□□ 0.31
FAM78BQ5VT40 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms