Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.84■■□□□ 1.41
PMS1P54277 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PMS1P54277 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PMS1P54277 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PMS1P54277 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
PMS1P54277 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PMS1P54277 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
PMS1P54277 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.84■■□□□ 1.41
PMS1P54277 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PMS1P54277 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
PMS1P54277 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PMS1P54277 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PMS1P54277 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.83■■□□□ 1.41
PMS1P54277 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PMS1P54277 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PMS1P54277 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PMS1P54277 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PMS1P54277 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PMS1P54277 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.83■■□□□ 1.41
PMS1P54277 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.83■■□□□ 1.41
PMS1P54277 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.83■■□□□ 1.41
PMS1P54277 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PMS1P54277 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PMS1P54277 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PMS1P54277 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.83■■□□□ 1.4
PMS1P54277 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PMS1P54277 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PMS1P54277 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
PMS1P54277 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PMS1P54277 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PMS1P54277 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PMS1P54277 AL138724.1-201ENST00000606771 1088 ntBASIC23.82■■□□□ 1.4
PMS1P54277 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.82■■□□□ 1.4
PMS1P54277 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
PMS1P54277 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.82■■□□□ 1.4
PMS1P54277 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PMS1P54277 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PMS1P54277 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
PMS1P54277 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.81■■□□□ 1.4
PMS1P54277 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 SLC47A1P1-202ENST00000449666 945 ntBASIC23.81■■□□□ 1.4
PMS1P54277 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.81■■□□□ 1.4
PMS1P54277 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.81■■□□□ 1.4
PMS1P54277 AC136469.2-201ENST00000623944 1028 ntBASIC23.81■■□□□ 1.4
PMS1P54277 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.81■■□□□ 1.4
PMS1P54277 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PMS1P54277 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS1P54277 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PMS1P54277 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS1P54277 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PMS1P54277 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.8■■□□□ 1.4
PMS1P54277 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS1P54277 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
PMS1P54277 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS1P54277 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.8■■□□□ 1.4
PMS1P54277 AL136116.3-201ENST00000402907 1138 ntBASIC23.8■■□□□ 1.4
PMS1P54277 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PMS1P54277 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS1P54277 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS1P54277 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS1P54277 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PMS1P54277 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PMS1P54277 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PMS1P54277 AC011298.3-201ENST00000615796 283 ntBASIC23.79■■□□□ 1.4
PMS1P54277 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.79■■□□□ 1.4
PMS1P54277 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS1P54277 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS1P54277 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS1P54277 OR7E47P-201ENST00000546390 1422 ntBASIC23.78■■□□□ 1.4
PMS1P54277 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PMS1P54277 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.78■■□□□ 1.4
PMS1P54277 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PMS1P54277 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.78■■□□□ 1.4
PMS1P54277 DUX4L19-201ENST00000557448 1267 ntBASIC23.78■■□□□ 1.4
PMS1P54277 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.78■■□□□ 1.4
PMS1P54277 AC068587.7-201ENST00000641602 218 ntBASIC23.78■■□□□ 1.4
PMS1P54277 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS1P54277 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PMS1P54277 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 AC010141.3-201ENST00000456659 717 ntBASIC23.77■■□□□ 1.4
PMS1P54277 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.77■■□□□ 1.4
PMS1P54277 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.77■■□□□ 1.4
PMS1P54277 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PMS1P54277 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms