Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 AC104452.1-201ENST00000638115 4453 ntTSL 512.11□□□□□ -0.476e-6■■■■■ 27.6
DDX42Q86XP3 MKRN1-210ENST00000475180 560 ntTSL 511.93□□□□□ -0.56e-6■■■■■ 27.6
DDX42Q86XP3 AC104452.1-207ENST00000638014 4510 ntTSL 511.81□□□□□ -0.526e-6■■■■■ 27.6
DDX42Q86XP3 AMT-230ENST00000636148 3865 ntTSL 511.79□□□□□ -0.526e-6■■■■■ 27.6
DDX42Q86XP3 AMT-236ENST00000636597 1509 ntTSL 5 BASIC11.28□□□□□ -0.66e-6■■■■■ 27.6
DDX42Q86XP3 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC10.57□□□□□ -0.726e-6■■■■■ 27.6
DDX42Q86XP3 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.856e-6■■■■■ 27.6
DDX42Q86XP3 AMT-209ENST00000465925 3976 ntTSL 59.72□□□□□ -0.856e-6■■■■■ 27.6
DDX42Q86XP3 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC9.33□□□□□ -0.926e-6■■■■■ 27.6
DDX42Q86XP3 NCAPG2-205ENST00000441982 2926 ntTSL 29.28□□□□□ -0.926e-6■■■■■ 27.6
DDX42Q86XP3 NCAPG2-204ENST00000432615 4134 ntTSL 59.21□□□□□ -0.936e-6■■■■■ 27.6
DDX42Q86XP3 NCAPG2-206ENST00000467785 3276 ntTSL 1 (best)9.05□□□□□ -0.966e-6■■■■■ 27.6
DDX42Q86XP3 MARCH6-210ENST00000511802 4734 ntTSL 28.12□□□□□ -1.116e-6■■■■■ 27.6
DDX42Q86XP3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.54□□□□□ -1.26e-6■■■■■ 27.6
DDX42Q86XP3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.236e-6■■■■■ 27.6
DDX42Q86XP3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.57□□□□□ -1.686e-6■■■■■ 27.6
DDX42Q86XP3 ASNS-207ENST00000437657 745 ntTSL 57.7□□□□□ -1.185e-13■■■■■ 27.3
DDX42Q86XP3 COPB1-209ENST00000533096 547 ntTSL 413.86□□□□□ -0.192e-15■■■■■ 26.8
DDX42Q86XP3 COPB1-206ENST00000529210 607 ntTSL 412.78□□□□□ -0.362e-15■■■■■ 26.8
DDX42Q86XP3 COPB1-207ENST00000529866 729 ntTSL 211.16□□□□□ -0.622e-15■■■■■ 26.8
DDX42Q86XP3 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.642e-15■■■■■ 26.8
DDX42Q86XP3 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.812e-15■■■■■ 26.8
DDX42Q86XP3 COPB1-211ENST00000534234 1584 ntTSL 59.44□□□□□ -0.92e-15■■■■■ 26.8
DDX42Q86XP3 COPB1-210ENST00000533533 537 ntTSL 49.19□□□□□ -0.942e-15■■■■■ 26.8
DDX42Q86XP3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.112e-15■■■■■ 26.8
DDX42Q86XP3 COPB1-212ENST00000534771 576 ntTSL 41.02□□□□□ -2.252e-15■■■■■ 26.8
DDX42Q86XP3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.312e-6■■■■□ 26.5
DDX42Q86XP3 LRRD1-202ENST00000422722 3511 ntTSL 213.17□□□□□ -0.32e-6■■■■□ 26.5
DDX42Q86XP3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.16□□□□□ -1.262e-6■■■■□ 26.5
DDX42Q86XP3 CYP51A1-203ENST00000435873 556 ntTSL 44.33□□□□□ -1.722e-6■■■■□ 26.5
DDX42Q86XP3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.05■□□□□ 0.82e-7■■■■□ 25.6
DDX42Q86XP3 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.532e-7■■■■□ 25.6
DDX42Q86XP3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.495e-9■■■■□ 24.7
DDX42Q86XP3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.292e-9■■■■□ 24.2
DDX42Q86XP3 FAM193B-211ENST00000508298 479 ntTSL 519.78■□□□□ 0.762e-9■■■■□ 24.2
DDX42Q86XP3 FAM193B-210ENST00000507587 825 ntTSL 218.95■□□□□ 0.622e-9■■■■□ 24.2
DDX42Q86XP3 FAM193B-213ENST00000510429 839 ntTSL 317.27■□□□□ 0.362e-9■■■■□ 24.2
DDX42Q86XP3 FAM193B-208ENST00000506955 4604 ntTSL 1 (best)16.75■□□□□ 0.272e-9■■■■□ 24.2
DDX42Q86XP3 DAZAP1-207ENST00000589484 3414 ntTSL 213.84□□□□□ -0.191e-6■■■■□ 23.6
DDX42Q86XP3 ASNS-213ENST00000454046 1947 ntTSL 58.69□□□□□ -1.024e-7■■■■□ 23.6
DDX42Q86XP3 MARS-211ENST00000548202 796 ntTSL 216.66■□□□□ 0.261e-6■■■■□ 23.4
DDX42Q86XP3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.952e-8■■■■□ 23.4
DDX42Q86XP3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.782e-8■■■■□ 23.4
DDX42Q86XP3 EIF3B-207ENST00000465670 2766 ntTSL 215.99■□□□□ 0.152e-8■■■■□ 23.4
DDX42Q86XP3 EIF3B-210ENST00000468611 1868 ntTSL 215.66■□□□□ 0.12e-8■■■■□ 23.4
DDX42Q86XP3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.072e-8■■■■□ 23.4
DDX42Q86XP3 EIF3B-211ENST00000475415 3745 ntTSL 211.33□□□□□ -0.62e-8■■■■□ 23.4
DDX42Q86XP3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.645e-9■■■■□ 23
DDX42Q86XP3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.75e-9■■■■□ 23
DDX42Q86XP3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.84■■□□□ 1.415e-9■■■■□ 23
DDX42Q86XP3 PABPN1-206ENST00000556809 969 ntTSL 223.62■■□□□ 1.375e-9■■■■□ 23
DDX42Q86XP3 SLC6A8-202ENST00000413787 468 ntTSL 518.97■□□□□ 0.635e-9■■■■□ 23
DDX42Q86XP3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.35e-9■■■■□ 23
DDX42Q86XP3 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.255e-9■■■■□ 23
DDX42Q86XP3 SLC6A8-206ENST00000457723 266 ntTSL 513.17□□□□□ -0.35e-9■■■■□ 23
DDX42Q86XP3 SLC6A8-205ENST00000442457 523 ntTSL 312.87□□□□□ -0.355e-9■■■■□ 23
DDX42Q86XP3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.653e-6■■■■□ 22.4
DDX42Q86XP3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.22■□□□□ 0.513e-6■■■■□ 22.4
DDX42Q86XP3 COQ8A-205ENST00000478406 3612 ntTSL 215.91■□□□□ 0.143e-6■■■■□ 22.4
DDX42Q86XP3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.013e-6■■■■□ 22.4
DDX42Q86XP3 VEGFA-217ENST00000518538 535 ntTSL 223.11■■□□□ 1.298e-11■■■■□ 22.3
DDX42Q86XP3 GUK1-234ENST00000492871 1065 ntTSL 327.34■■□□□ 1.972e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-215ENST00000462807 628 ntTSL 227.19■■□□□ 1.942e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-227ENST00000485083 871 ntTSL 326.56■■□□□ 1.842e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-235ENST00000493138 694 ntTSL 326.56■■□□□ 1.842e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.56■■□□□ 1.682e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.43■■□□□ 1.342e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.69■■□□□ 1.222e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-213ENST00000453943 656 ntTSL 1 (best)22.26■■□□□ 1.152e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.032e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.022e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-236ENST00000493209 735 ntTSL 520.37■□□□□ 0.852e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.68■□□□□ 0.742e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-230ENST00000485838 774 ntTSL 319.36■□□□□ 0.692e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.512e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.462e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-228ENST00000485168 737 ntTSL 317.49■□□□□ 0.392e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.282e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-237ENST00000495999 555 ntTSL 316.58■□□□□ 0.242e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-214ENST00000460224 639 ntTSL 516.47■□□□□ 0.232e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-219ENST00000470040 2548 ntTSL 216.41■□□□□ 0.222e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-216ENST00000464858 633 ntTSL 316.39■□□□□ 0.212e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-238ENST00000498092 865 ntTSL 516.12■□□□□ 0.172e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16■□□□□ 0.152e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-223ENST00000478725 414 ntTSL 314.48□□□□□ -0.092e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-211ENST00000412265 1012 ntTSL 514.1□□□□□ -0.152e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-221ENST00000472939 314 ntTSL 314.03□□□□□ -0.162e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-232ENST00000486668 738 ntTSL 313.54□□□□□ -0.242e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-229ENST00000485733 345 ntTSL 313.31□□□□□ -0.282e-12■■■■□ 22.2
DDX42Q86XP3 GUK1-212ENST00000435153 865 ntTSL 313.08□□□□□ -0.322e-12■■■■□ 22.2
DDX42Q86XP3 MVD-211ENST00000565720 436 ntTSL 319.06■□□□□ 0.641e-8■■■■□ 21.9
DDX42Q86XP3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.424e-6■■■■□ 21.9
DDX42Q86XP3 SLC7A11-202ENST00000509248 797 ntTSL 54.82□□□□□ -1.644e-6■■■■□ 21.9
DDX42Q86XP3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.74■■□□□ 1.712e-6■■■■□ 21.1
DDX42Q86XP3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.612e-6■■■■□ 21.1
DDX42Q86XP3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.112e-6■■■■□ 21.1
DDX42Q86XP3 EZH2-209ENST00000492143 3641 ntTSL 218.41■□□□□ 0.542e-6■■■■□ 21.1
DDX42Q86XP3 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.162e-6■■■■□ 21.1
DDX42Q86XP3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.12e-6■■■■□ 21.1
DDX42Q86XP3 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.766e-7■■■■□ 21
Retrieved 100 of 2,477 protein–RNA pairs in 19.5 ms