RNA–Protein interactions for RNA: ENST00000442457.1

SLC6A8-205, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-205ENST00000442457 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
SLC6A8-205ENST00000442457 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
SLC6A8-205ENST00000442457 ABCC9O60706 1549 aa26.66■■□□□ 1.86
SLC6A8-205ENST00000442457 RB1CC1Q8TDY2 1594 aa25.6■■□□□ 1.69
SLC6A8-205ENST00000442457 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
SLC6A8-205ENST00000442457 NACADO15069 1562 aa25.46■■□□□ 1.67
SLC6A8-205ENST00000442457 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
SLC6A8-205ENST00000442457 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
SLC6A8-205ENST00000442457 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
SLC6A8-205ENST00000442457 MYO15BQ96JP2 1530 aa25.18■■□□□ 1.62
SLC6A8-205ENST00000442457 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
SLC6A8-205ENST00000442457 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
SLC6A8-205ENST00000442457 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
SLC6A8-205ENST00000442457 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
SLC6A8-205ENST00000442457 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
SLC6A8-205ENST00000442457 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
SLC6A8-205ENST00000442457 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
SLC6A8-205ENST00000442457 EIF4G1Q04637 1599 aaKnown RBP24.21■■□□□ 1.47
SLC6A8-205ENST00000442457 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
SLC6A8-205ENST00000442457 CECR2Q9BXF3 1484 aa23.95■■□□□ 1.42
SLC6A8-205ENST00000442457 SMARCA4P51532 1647 aa23.65■■□□□ 1.38
SLC6A8-205ENST00000442457 BAZ1AQ9NRL2 1556 aaPredicted RBP23.52■■□□□ 1.36
SLC6A8-205ENST00000442457 SMARCA2P51531 1590 aa23.46■■□□□ 1.35
SLC6A8-205ENST00000442457 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
SLC6A8-205ENST00000442457 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
SLC6A8-205ENST00000442457 NCAPD3P42695 1498 aa23.39■■□□□ 1.34
SLC6A8-205ENST00000442457 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
SLC6A8-205ENST00000442457 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
SLC6A8-205ENST00000442457 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
SLC6A8-205ENST00000442457 WIZO95785 1651 aa23.17■■□□□ 1.3
SLC6A8-205ENST00000442457 NESP48681 1621 aa23.02■■□□□ 1.28
SLC6A8-205ENST00000442457 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
SLC6A8-205ENST00000442457 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
SLC6A8-205ENST00000442457 KIF21AQ7Z4S6 1674 aa22.92■■□□□ 1.26
SLC6A8-205ENST00000442457 RSF1Q96T23 1441 aaPredicted RBP22.9■■□□□ 1.26
SLC6A8-205ENST00000442457 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.26
SLC6A8-205ENST00000442457 THOC2Q8NI27 1593 aaKnown RBP22.86■■□□□ 1.25
SLC6A8-205ENST00000442457 CUX2O14529 1486 aa22.82■■□□□ 1.24
SLC6A8-205ENST00000442457 PRDM2Q13029 1718 aa22.7■■□□□ 1.22
SLC6A8-205ENST00000442457 PDS5BQ9NTI5 1447 aa22.67■■□□□ 1.22
SLC6A8-205ENST00000442457 CADPSQ9ULU8 1353 aa22.67■■□□□ 1.22
SLC6A8-205ENST00000442457 CFTRP13569 1480 aa22.56■■□□□ 1.2
SLC6A8-205ENST00000442457 MRC2Q9UBG0 1479 aa22.56■■□□□ 1.2
SLC6A8-205ENST00000442457 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
SLC6A8-205ENST00000442457 WDR62O43379 1518 aa22.56■■□□□ 1.2
SLC6A8-205ENST00000442457 FANCD2Q9BXW9 1451 aa22.53■■□□□ 1.2
SLC6A8-205ENST00000442457 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
SLC6A8-205ENST00000442457 URB2Q14146 1524 aaKnown RBP22.35■■□□□ 1.17
SLC6A8-205ENST00000442457 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
SLC6A8-205ENST00000442457 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
SLC6A8-205ENST00000442457 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
SLC6A8-205ENST00000442457 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
SLC6A8-205ENST00000442457 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
SLC6A8-205ENST00000442457 EIF4G3O43432 1585 aaKnown RBP22.06■■□□□ 1.12
SLC6A8-205ENST00000442457 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
SLC6A8-205ENST00000442457 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
SLC6A8-205ENST00000442457 TARBP1Q13395 1621 aaKnown RBP22■■□□□ 1.11
SLC6A8-205ENST00000442457 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
SLC6A8-205ENST00000442457 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
SLC6A8-205ENST00000442457 CUX1P39880 1505 aa21.94■■□□□ 1.1
SLC6A8-205ENST00000442457 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
SLC6A8-205ENST00000442457 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
SLC6A8-205ENST00000442457 CHD1O14646 1710 aa21.86■■□□□ 1.09
SLC6A8-205ENST00000442457 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
SLC6A8-205ENST00000442457 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
SLC6A8-205ENST00000442457 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
SLC6A8-205ENST00000442457 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.071e-25■■■■■ 40.5
SLC6A8-205ENST00000442457 SYNJ1O43426 1573 aa21.75■■□□□ 1.07
SLC6A8-205ENST00000442457 SOGA1O94964 1423 aa21.74■■□□□ 1.07
SLC6A8-205ENST00000442457 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
SLC6A8-205ENST00000442457 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
SLC6A8-205ENST00000442457 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
SLC6A8-205ENST00000442457 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
SLC6A8-205ENST00000442457 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
SLC6A8-205ENST00000442457 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
SLC6A8-205ENST00000442457 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
SLC6A8-205ENST00000442457 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
SLC6A8-205ENST00000442457 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
SLC6A8-205ENST00000442457 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
SLC6A8-205ENST00000442457 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
SLC6A8-205ENST00000442457 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
SLC6A8-205ENST00000442457 MAGI1Q96QZ7 1491 aaPredicted RBP21.59■■□□□ 1.05
SLC6A8-205ENST00000442457 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
SLC6A8-205ENST00000442457 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
SLC6A8-205ENST00000442457 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
SLC6A8-205ENST00000442457 SYNJ2O15056 1496 aa21.51■■□□□ 1.03
SLC6A8-205ENST00000442457 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
SLC6A8-205ENST00000442457 FBLN2P98095 1184 aa21.47■■□□□ 1.03
SLC6A8-205ENST00000442457 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
SLC6A8-205ENST00000442457 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.02
SLC6A8-205ENST00000442457 GRIN2AQ12879 1464 aa21.37■■□□□ 1.01
SLC6A8-205ENST00000442457 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
SLC6A8-205ENST00000442457 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
SLC6A8-205ENST00000442457 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
SLC6A8-205ENST00000442457 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
SLC6A8-205ENST00000442457 CUL7Q14999 1698 aa21.27■■□□□ 1
SLC6A8-205ENST00000442457 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
SLC6A8-205ENST00000442457 NUP160Q12769 1436 aa21.23■□□□□ 0.99
SLC6A8-205ENST00000442457 SHROOM2Q13796 1616 aa21.23■□□□□ 0.99
SLC6A8-205ENST00000442457 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms