RNA–Protein interactions for RNA: ENST00000468611.5

EIF3B-210, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 1,868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-210ENST00000468611 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
EIF3B-210ENST00000468611 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
EIF3B-210ENST00000468611 ABCC9O60706 1549 aa29.83■■■□□ 2.37
EIF3B-210ENST00000468611 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
EIF3B-210ENST00000468611 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
EIF3B-210ENST00000468611 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
EIF3B-210ENST00000468611 NACADO15069 1562 aa29.04■■■□□ 2.24
EIF3B-210ENST00000468611 MYO15BQ96JP2 1530 aa29.03■■■□□ 2.24
EIF3B-210ENST00000468611 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
EIF3B-210ENST00000468611 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
EIF3B-210ENST00000468611 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
EIF3B-210ENST00000468611 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
EIF3B-210ENST00000468611 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.087e-7■■■■□ 20.1
EIF3B-210ENST00000468611 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
EIF3B-210ENST00000468611 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
EIF3B-210ENST00000468611 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
EIF3B-210ENST00000468611 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
EIF3B-210ENST00000468611 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
EIF3B-210ENST00000468611 EIF4G1Q04637 1599 aaKnown RBP27.25■■□□□ 1.95
EIF3B-210ENST00000468611 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
EIF3B-210ENST00000468611 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
EIF3B-210ENST00000468611 WIZO95785 1651 aa27.01■■□□□ 1.92
EIF3B-210ENST00000468611 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
EIF3B-210ENST00000468611 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
EIF3B-210ENST00000468611 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
EIF3B-210ENST00000468611 PEG3Q9GZU2 1588 aa26.93■■□□□ 1.9
EIF3B-210ENST00000468611 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
EIF3B-210ENST00000468611 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
EIF3B-210ENST00000468611 DNAJC5BQ9UF47 199 aa26.73■■□□□ 1.87
EIF3B-210ENST00000468611 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
EIF3B-210ENST00000468611 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
EIF3B-210ENST00000468611 CCDC88BA6NC98 1476 aa26.44■■□□□ 1.82
EIF3B-210ENST00000468611 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
EIF3B-210ENST00000468611 CFTRP13569 1480 aa26.06■■□□□ 1.76
EIF3B-210ENST00000468611 NESP48681 1621 aa26.01■■□□□ 1.75
EIF3B-210ENST00000468611 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
EIF3B-210ENST00000468611 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
EIF3B-210ENST00000468611 PDS5BQ9NTI5 1447 aa25.82■■□□□ 1.72
EIF3B-210ENST00000468611 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
EIF3B-210ENST00000468611 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
EIF3B-210ENST00000468611 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.71
EIF3B-210ENST00000468611 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
EIF3B-210ENST00000468611 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
EIF3B-210ENST00000468611 ERCC6Q03468 1493 aa25.67■■□□□ 1.7
EIF3B-210ENST00000468611 WRNQ14191 1432 aaPredicted RBP eCLIP25.64■■□□□ 1.69
EIF3B-210ENST00000468611 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
EIF3B-210ENST00000468611 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
EIF3B-210ENST00000468611 CUX1P39880 1505 aa25.52■■□□□ 1.68
EIF3B-210ENST00000468611 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
EIF3B-210ENST00000468611 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
EIF3B-210ENST00000468611 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
EIF3B-210ENST00000468611 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
EIF3B-210ENST00000468611 TOPBP1Q92547 1522 aa25.45■■□□□ 1.67
EIF3B-210ENST00000468611 BIVM-ERCC5R4GMW8 1640 aa25.44■■□□□ 1.66
EIF3B-210ENST00000468611 THOC2Q8NI27 1593 aaKnown RBP25.4■■□□□ 1.66
EIF3B-210ENST00000468611 WDR62O43379 1518 aa25.37■■□□□ 1.65
EIF3B-210ENST00000468611 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
EIF3B-210ENST00000468611 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
EIF3B-210ENST00000468611 SOGA1O94964 1423 aa25.21■■□□□ 1.63
EIF3B-210ENST00000468611 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
EIF3B-210ENST00000468611 CUX2O14529 1486 aa25.16■■□□□ 1.62
EIF3B-210ENST00000468611 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
EIF3B-210ENST00000468611 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
EIF3B-210ENST00000468611 TARBP1Q13395 1621 aaKnown RBP25.1■■□□□ 1.61
EIF3B-210ENST00000468611 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
EIF3B-210ENST00000468611 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
EIF3B-210ENST00000468611 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
EIF3B-210ENST00000468611 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
EIF3B-210ENST00000468611 TDRD9Q8NDG6 1382 aaKnown RBP25.02■■□□□ 1.6
EIF3B-210ENST00000468611 EEA1Q15075 1411 aa24.99■■□□□ 1.59
EIF3B-210ENST00000468611 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
EIF3B-210ENST00000468611 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.582e-7■■■■■ 27
EIF3B-210ENST00000468611 GAPVD1Q14C86 1478 aa24.93■■□□□ 1.58
EIF3B-210ENST00000468611 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
EIF3B-210ENST00000468611 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
EIF3B-210ENST00000468611 EIF4G3O43432 1585 aaKnown RBP24.89■■□□□ 1.58
EIF3B-210ENST00000468611 IGF1RP08069 1367 aa24.84■■□□□ 1.57
EIF3B-210ENST00000468611 PBRM1Q86U86 1689 aa24.82■■□□□ 1.56
EIF3B-210ENST00000468611 GRIN2BQ13224 1484 aa24.81■■□□□ 1.56
EIF3B-210ENST00000468611 ERICH3Q5RHP9 1530 aa24.8■■□□□ 1.56
EIF3B-210ENST00000468611 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
EIF3B-210ENST00000468611 CARMIL1Q5VZK9 1371 aa24.73■■□□□ 1.55
EIF3B-210ENST00000468611 CUL7Q14999 1698 aa24.73■■□□□ 1.55
EIF3B-210ENST00000468611 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
EIF3B-210ENST00000468611 PRXQ9BXM0 1461 aa24.71■■□□□ 1.55
EIF3B-210ENST00000468611 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.54
EIF3B-210ENST00000468611 KIF21BO75037 1637 aa24.69■■□□□ 1.54
EIF3B-210ENST00000468611 MAGI1Q96QZ7 1491 aaPredicted RBP24.66■■□□□ 1.54
EIF3B-210ENST00000468611 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
EIF3B-210ENST00000468611 ADAMTS12P58397 1594 aa24.65■■□□□ 1.54
EIF3B-210ENST00000468611 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
EIF3B-210ENST00000468611 GOLGA3Q08378 1498 aa24.63■■□□□ 1.53
EIF3B-210ENST00000468611 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
EIF3B-210ENST00000468611 FBLN2P98095 1184 aa24.59■■□□□ 1.53
EIF3B-210ENST00000468611 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.52
EIF3B-210ENST00000468611 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
EIF3B-210ENST00000468611 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
EIF3B-210ENST00000468611 CHD1O14646 1710 aa24.45■■□□□ 1.5
EIF3B-210ENST00000468611 TNIKQ9UKE5 1360 aa24.43■■□□□ 1.5
EIF3B-210ENST00000468611 CTTNBP2Q8WZ74 1663 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms