RNA–Protein interactions for RNA: ENST00000413787.1

SLC6A8-202, Transcript of solute carrier family 6 member 8, humanhuman

TSL 5

Gene SLC6A8, Length 468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-202ENST00000413787 NISCHQ9Y2I1 1504 aa44.19■■■■■ 4.67
SLC6A8-202ENST00000413787 CCDC180Q9P1Z9 1646 aa39.43■■■■□ 3.9
SLC6A8-202ENST00000413787 ABCC9O60706 1549 aa38.85■■■■□ 3.81
SLC6A8-202ENST00000413787 RB1CC1Q8TDY2 1594 aa37.25■■■■□ 3.55
SLC6A8-202ENST00000413787 NACADO15069 1562 aa37.13■■■■□ 3.53
SLC6A8-202ENST00000413787 DCAF8L2P0C7V8 631 aa37.04■■■■□ 3.52
SLC6A8-202ENST00000413787 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
SLC6A8-202ENST00000413787 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
SLC6A8-202ENST00000413787 DCAF1Q9Y4B6 1507 aa36.54■■■■□ 3.44
SLC6A8-202ENST00000413787 UNC13AQ9UPW8 1703 aa36.44■■■■□ 3.42
SLC6A8-202ENST00000413787 PABPN1Q86U42 306 aaKnown RBP eCLIP36.26■■■■□ 3.4
SLC6A8-202ENST00000413787 BICRAQ9NZM4 1560 aa36.15■■■■□ 3.38
SLC6A8-202ENST00000413787 SCRIBQ14160 1630 aa35.94■■■■□ 3.34
SLC6A8-202ENST00000413787 DNAJC5BQ9UF47 199 aa35.94■■■■□ 3.34
SLC6A8-202ENST00000413787 SHROOM4Q9ULL8 1493 aa35.71■■■■□ 3.31
SLC6A8-202ENST00000413787 EIF4G1Q04637 1599 aaKnown RBP35.21■■■■□ 3.23
SLC6A8-202ENST00000413787 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
SLC6A8-202ENST00000413787 CECR2Q9BXF3 1484 aa34.94■■■■□ 3.18
SLC6A8-202ENST00000413787 SMARCA4P51532 1647 aa34.36■■■■□ 3.09
SLC6A8-202ENST00000413787 BAZ1AQ9NRL2 1556 aaPredicted RBP34.27■■■■□ 3.08
SLC6A8-202ENST00000413787 NCAPD3P42695 1498 aa34.27■■■■□ 3.08
SLC6A8-202ENST00000413787 ATAD2BQ9ULI0 1458 aa34.24■■■■□ 3.07
SLC6A8-202ENST00000413787 SMARCA2P51531 1590 aa34.19■■■■□ 3.06
SLC6A8-202ENST00000413787 HMGXB3Q12766 1538 aa34.07■■■■□ 3.04
SLC6A8-202ENST00000413787 MROH2BQ7Z745 1585 aa34.06■■■■□ 3.04
SLC6A8-202ENST00000413787 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
SLC6A8-202ENST00000413787 BAZ1BQ9UIG0 1483 aaKnown RBP33.94■■■■□ 3.02
SLC6A8-202ENST00000413787 WIZO95785 1651 aa33.68■■■□□ 2.98
SLC6A8-202ENST00000413787 RSF1Q96T23 1441 aaPredicted RBP33.56■■■□□ 2.96
SLC6A8-202ENST00000413787 NESP48681 1621 aa33.55■■■□□ 2.96
SLC6A8-202ENST00000413787 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
SLC6A8-202ENST00000413787 LAMC3Q9Y6N6 1575 aa33.41■■■□□ 2.94
SLC6A8-202ENST00000413787 TOP2AP11388 1531 aaKnown RBP33.29■■■□□ 2.92
SLC6A8-202ENST00000413787 CUX2O14529 1486 aa33.25■■■□□ 2.91
SLC6A8-202ENST00000413787 CADPSQ9ULU8 1353 aa33.25■■■□□ 2.91
SLC6A8-202ENST00000413787 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
SLC6A8-202ENST00000413787 KIF21AQ7Z4S6 1674 aa33.15■■■□□ 2.9
SLC6A8-202ENST00000413787 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
SLC6A8-202ENST00000413787 CFTRP13569 1480 aa32.99■■■□□ 2.87
SLC6A8-202ENST00000413787 CCDC88BA6NC98 1476 aa32.91■■■□□ 2.86
SLC6A8-202ENST00000413787 FANCD2Q9BXW9 1451 aa32.87■■■□□ 2.85
SLC6A8-202ENST00000413787 MRC2Q9UBG0 1479 aa32.86■■■□□ 2.85
SLC6A8-202ENST00000413787 CEP164Q9UPV0 1460 aa32.86■■■□□ 2.85
SLC6A8-202ENST00000413787 WDR62O43379 1518 aa32.77■■■□□ 2.84
SLC6A8-202ENST00000413787 PRDM2Q13029 1718 aa32.74■■■□□ 2.83
SLC6A8-202ENST00000413787 DNAJC5Q9H3Z4 198 aa32.59■■■□□ 2.81
SLC6A8-202ENST00000413787 URB2Q14146 1524 aaKnown RBP32.57■■■□□ 2.8
SLC6A8-202ENST00000413787 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
SLC6A8-202ENST00000413787 TOPBP1Q92547 1522 aa32.32■■■□□ 2.76
SLC6A8-202ENST00000413787 ABCC8Q09428 1581 aa32.28■■■□□ 2.76
SLC6A8-202ENST00000413787 DNMBPQ6XZF7 1577 aa32.25■■■□□ 2.75
SLC6A8-202ENST00000413787 IFT140Q96RY7 1462 aa32.17■■■□□ 2.74
SLC6A8-202ENST00000413787 ZNF608Q9ULD9 1512 aaPredicted RBP32.07■■■□□ 2.72
SLC6A8-202ENST00000413787 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
SLC6A8-202ENST00000413787 TARBP1Q13395 1621 aaKnown RBP32■■■□□ 2.71
SLC6A8-202ENST00000413787 CUX1P39880 1505 aa31.97■■■□□ 2.71
SLC6A8-202ENST00000413787 EIF4G3O43432 1585 aaKnown RBP31.93■■■□□ 2.7
SLC6A8-202ENST00000413787 FGD5Q6ZNL6 1462 aa31.91■■■□□ 2.7
SLC6A8-202ENST00000413787 RAD54L2Q9Y4B4 1467 aa31.89■■■□□ 2.7
SLC6A8-202ENST00000413787 SOGA1O94964 1423 aa31.88■■■□□ 2.69
SLC6A8-202ENST00000413787 AQRO60306 1485 aaKnown RBP eCLIP31.84■■■□□ 2.691e-25■■■■■ 36.6
SLC6A8-202ENST00000413787 OSCARQ8IYS5 282 aa31.83■■■□□ 2.69
SLC6A8-202ENST00000413787 TDRD9Q8NDG6 1382 aaKnown RBP31.75■■■□□ 2.67
SLC6A8-202ENST00000413787 WDR97A6NE52 1622 aa31.71■■■□□ 2.67
SLC6A8-202ENST00000413787 WRNQ14191 1432 aaPredicted RBP eCLIP31.65■■■□□ 2.66
SLC6A8-202ENST00000413787 BIVM-ERCC5R4GMW8 1640 aa31.62■■■□□ 2.65
SLC6A8-202ENST00000413787 TOP2BQ02880 1626 aa31.61■■■□□ 2.65
SLC6A8-202ENST00000413787 CHD1O14646 1710 aa31.61■■■□□ 2.65
SLC6A8-202ENST00000413787 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
SLC6A8-202ENST00000413787 ABCA10Q8WWZ4 1543 aa31.57■■■□□ 2.64
SLC6A8-202ENST00000413787 GRIN2BQ13224 1484 aa31.54■■■□□ 2.64
SLC6A8-202ENST00000413787 SNAPC4Q5SXM2 1469 aa31.54■■■□□ 2.64
SLC6A8-202ENST00000413787 FBLN2P98095 1184 aa31.52■■■□□ 2.64
SLC6A8-202ENST00000413787 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
SLC6A8-202ENST00000413787 MAGI1Q96QZ7 1491 aaPredicted RBP31.49■■■□□ 2.63
SLC6A8-202ENST00000413787 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
SLC6A8-202ENST00000413787 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
SLC6A8-202ENST00000413787 TRIM41Q8WV44 630 aa31.39■■■□□ 2.62
SLC6A8-202ENST00000413787 CHMP7Q8WUX9 453 aaPredicted RBP31.38■■■□□ 2.61
SLC6A8-202ENST00000413787 SYNJ2O15056 1496 aa31.37■■■□□ 2.61
SLC6A8-202ENST00000413787 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
SLC6A8-202ENST00000413787 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
SLC6A8-202ENST00000413787 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
SLC6A8-202ENST00000413787 ARHGEF11O15085 1522 aa31.33■■■□□ 2.61
SLC6A8-202ENST00000413787 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
SLC6A8-202ENST00000413787 ADAMTS12P58397 1594 aa31.21■■■□□ 2.59
SLC6A8-202ENST00000413787 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
SLC6A8-202ENST00000413787 GRIN2AQ12879 1464 aa31.14■■■□□ 2.58
SLC6A8-202ENST00000413787 FHAD1B1AJZ9 1412 aa31.13■■■□□ 2.57
SLC6A8-202ENST00000413787 CYB5RLQ6IPT4 315 aa31.05■■■□□ 2.56
SLC6A8-202ENST00000413787 ARAP1Q96P48 1450 aa31.05■■■□□ 2.56
SLC6A8-202ENST00000413787 NUP160Q12769 1436 aa31.02■■■□□ 2.56
SLC6A8-202ENST00000413787 CEP170Q5SW79 1584 aa31■■■□□ 2.55
SLC6A8-202ENST00000413787 KIF27Q86VH2 1401 aa31■■■□□ 2.55
SLC6A8-202ENST00000413787 IGF1RP08069 1367 aa30.92■■■□□ 2.54
SLC6A8-202ENST00000413787 CUL7Q14999 1698 aa30.85■■■□□ 2.53
SLC6A8-202ENST00000413787 SHROOM2Q13796 1616 aa30.83■■■□□ 2.53
SLC6A8-202ENST00000413787 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
SLC6A8-202ENST00000413787 RUSC2Q8N2Y8 1516 aa30.74■■■□□ 2.51
SLC6A8-202ENST00000413787 CARMIL1Q5VZK9 1371 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms