RNA–Protein interactions for RNA: ENST00000475180.5

MKRN1-210, Transcript of makorin ring finger protein 1, humanhuman

TSL 5

Gene MKRN1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-210ENST00000475180 NISCHQ9Y2I1 1504 aa27.18■■□□□ 1.94
MKRN1-210ENST00000475180 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
MKRN1-210ENST00000475180 ABCC9O60706 1549 aa23.24■■□□□ 1.31
MKRN1-210ENST00000475180 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
MKRN1-210ENST00000475180 NACADO15069 1562 aa22.63■■□□□ 1.21
MKRN1-210ENST00000475180 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
MKRN1-210ENST00000475180 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.21
MKRN1-210ENST00000475180 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.2
MKRN1-210ENST00000475180 DCAF8L2P0C7V8 631 aa22.49■■□□□ 1.19
MKRN1-210ENST00000475180 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
MKRN1-210ENST00000475180 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
MKRN1-210ENST00000475180 BICRAQ9NZM4 1560 aa21.81■■□□□ 1.08
MKRN1-210ENST00000475180 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.08
MKRN1-210ENST00000475180 PABPN1Q86U42 306 aaKnown RBP eCLIP21.71■■□□□ 1.07
MKRN1-210ENST00000475180 EIF4G1Q04637 1599 aaKnown RBP21.25■□□□□ 0.99
MKRN1-210ENST00000475180 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
MKRN1-210ENST00000475180 CC2D2AQ9P2K1 1620 aa21.08■□□□□ 0.97
MKRN1-210ENST00000475180 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
MKRN1-210ENST00000475180 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
MKRN1-210ENST00000475180 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
MKRN1-210ENST00000475180 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
MKRN1-210ENST00000475180 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
MKRN1-210ENST00000475180 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.93
MKRN1-210ENST00000475180 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
MKRN1-210ENST00000475180 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
MKRN1-210ENST00000475180 HMGXB3Q12766 1538 aa20.79■□□□□ 0.92
MKRN1-210ENST00000475180 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
MKRN1-210ENST00000475180 BAZ1BQ9UIG0 1483 aaKnown RBP20.72■□□□□ 0.91
MKRN1-210ENST00000475180 WIZO95785 1651 aa20.67■□□□□ 0.9
MKRN1-210ENST00000475180 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
MKRN1-210ENST00000475180 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
MKRN1-210ENST00000475180 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.85
MKRN1-210ENST00000475180 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
MKRN1-210ENST00000475180 CCDC88BA6NC98 1476 aa20.25■□□□□ 0.83
MKRN1-210ENST00000475180 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
MKRN1-210ENST00000475180 CFTRP13569 1480 aa20.17■□□□□ 0.82
MKRN1-210ENST00000475180 NESP48681 1621 aa20.16■□□□□ 0.82
MKRN1-210ENST00000475180 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
MKRN1-210ENST00000475180 ERCC6Q03468 1493 aa20.08■□□□□ 0.81
MKRN1-210ENST00000475180 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
MKRN1-210ENST00000475180 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
MKRN1-210ENST00000475180 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
MKRN1-210ENST00000475180 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
MKRN1-210ENST00000475180 THOC2Q8NI27 1593 aaKnown RBP19.89■□□□□ 0.77
MKRN1-210ENST00000475180 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
MKRN1-210ENST00000475180 CUX2O14529 1486 aa19.84■□□□□ 0.77
MKRN1-210ENST00000475180 WDR62O43379 1518 aa19.82■□□□□ 0.76
MKRN1-210ENST00000475180 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
MKRN1-210ENST00000475180 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
MKRN1-210ENST00000475180 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
MKRN1-210ENST00000475180 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
MKRN1-210ENST00000475180 CUX1P39880 1505 aa19.61■□□□□ 0.73
MKRN1-210ENST00000475180 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
MKRN1-210ENST00000475180 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
MKRN1-210ENST00000475180 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
MKRN1-210ENST00000475180 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
MKRN1-210ENST00000475180 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
MKRN1-210ENST00000475180 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
MKRN1-210ENST00000475180 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
MKRN1-210ENST00000475180 SOGA1O94964 1423 aa19.46■□□□□ 0.71
MKRN1-210ENST00000475180 TARBP1Q13395 1621 aaKnown RBP19.46■□□□□ 0.71
MKRN1-210ENST00000475180 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
MKRN1-210ENST00000475180 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
MKRN1-210ENST00000475180 RAD54L2Q9Y4B4 1467 aa19.39■□□□□ 0.69
MKRN1-210ENST00000475180 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
MKRN1-210ENST00000475180 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
MKRN1-210ENST00000475180 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
MKRN1-210ENST00000475180 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
MKRN1-210ENST00000475180 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
MKRN1-210ENST00000475180 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.67
MKRN1-210ENST00000475180 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
MKRN1-210ENST00000475180 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
MKRN1-210ENST00000475180 GRIN2BQ13224 1484 aa19.24■□□□□ 0.67
MKRN1-210ENST00000475180 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
MKRN1-210ENST00000475180 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
MKRN1-210ENST00000475180 MAGI1Q96QZ7 1491 aaPredicted RBP19.19■□□□□ 0.66
MKRN1-210ENST00000475180 ERICH3Q5RHP9 1530 aa19.17■□□□□ 0.66
MKRN1-210ENST00000475180 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
MKRN1-210ENST00000475180 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
MKRN1-210ENST00000475180 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
MKRN1-210ENST00000475180 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
MKRN1-210ENST00000475180 CUL7Q14999 1698 aa19.05■□□□□ 0.64
MKRN1-210ENST00000475180 EEA1Q15075 1411 aa19.04■□□□□ 0.64
MKRN1-210ENST00000475180 IGF1RP08069 1367 aa19.04■□□□□ 0.64
MKRN1-210ENST00000475180 CHD1O14646 1710 aa19.03■□□□□ 0.64
MKRN1-210ENST00000475180 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
MKRN1-210ENST00000475180 OSCARQ8IYS5 282 aa19■□□□□ 0.63
MKRN1-210ENST00000475180 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
MKRN1-210ENST00000475180 FBLN2P98095 1184 aa18.98■□□□□ 0.63
MKRN1-210ENST00000475180 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
MKRN1-210ENST00000475180 CARMIL1Q5VZK9 1371 aa18.94■□□□□ 0.62
MKRN1-210ENST00000475180 NUP160Q12769 1436 aa18.89■□□□□ 0.61
MKRN1-210ENST00000475180 RAPGEF2Q9Y4G8 1499 aa18.88■□□□□ 0.61
MKRN1-210ENST00000475180 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
MKRN1-210ENST00000475180 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
MKRN1-210ENST00000475180 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
MKRN1-210ENST00000475180 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
MKRN1-210ENST00000475180 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
MKRN1-210ENST00000475180 KIAA0586Q9BVV6 1533 aa18.78■□□□□ 0.6
MKRN1-210ENST00000475180 KIF21BO75037 1637 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms