Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 STR3YGL184C 1398 nt10.5□□□□□ -0.73
SPC98P53540 UTH1YKR042W 1098 nt10.49□□□□□ -0.73
SPC98P53540 AQY2YLL052C 450 nt10.48□□□□□ -0.73
SPC98P53540 POM34YLR018C 900 nt10.48□□□□□ -0.73
SPC98P53540 HIP1YGR191W 1812 nt10.47□□□□□ -0.73
SPC98P53540 RDN18-1RDN18-1 1800 nt10.47□□□□□ -0.73
SPC98P53540 RDN18-2RDN18-2 1800 nt10.47□□□□□ -0.73
SPC98P53540 PEX2YJL210W 816 nt10.46□□□□□ -0.73
SPC98P53540 RAD23YEL037C 1197 nt10.45□□□□□ -0.74
SPC98P53540 YCL074WYCL074W 927 nt10.44□□□□□ -0.74
SPC98P53540 PRO1YDR300C 1287 nt10.43□□□□□ -0.74
SPC98P53540 YML089CYML089C 369 nt10.43□□□□□ -0.74
SPC98P53540 LSC2YGR244C 1284 nt10.42□□□□□ -0.74
SPC98P53540 TSC10YBR265W 963 nt10.41□□□□□ -0.74
SPC98P53540 NRT1YOR071C 1797 nt10.4□□□□□ -0.74
SPC98P53540 CAB5YDR196C 726 nt10.39□□□□□ -0.75
SPC98P53540 YGR012WYGR012W 1182 nt10.39□□□□□ -0.75
SPC98P53540 YLR437C-AYLR437C-A 228 nt10.39□□□□□ -0.75
SPC98P53540 TIF6YPR016C 738 nt10.38□□□□□ -0.75
SPC98P53540 ATG15YCR068W 1563 nt10.37□□□□□ -0.75
SPC98P53540 MET28YIR017C 564 nt10.36□□□□□ -0.75
SPC98P53540 RIB3YDR487C 627 nt10.34□□□□□ -0.75
SPC98P53540 ARP6YLR085C 1317 nt10.33□□□□□ -0.76
SPC98P53540 YLR279WYLR279W 390 nt10.32□□□□□ -0.76
SPC98P53540 FUR4YBR021W 1902 nt10.3□□□□□ -0.76
SPC98P53540 RAD51YER095W 1203 nt10.29□□□□□ -0.76
SPC98P53540 RTN2YDL204W 1182 nt10.27□□□□□ -0.77
SPC98P53540 GAP1YKR039W 1809 nt10.27□□□□□ -0.77
SPC98P53540 MSB4YOL112W 1479 nt10.26□□□□□ -0.77
SPC98P53540 FIT3YOR383C 615 nt10.26□□□□□ -0.77
SPC98P53540 MCH5YOR306C 1566 nt10.23□□□□□ -0.77
SPC98P53540 PLB1YMR008C 1995 nt10.23□□□□□ -0.77
SPC98P53540 HSP60YLR259C 1719 nt10.22□□□□□ -0.77
SPC98P53540 STE4YOR212W 1272 nt10.2□□□□□ -0.78
SPC98P53540 YLR349WYLR349W 507 nt10.19□□□□□ -0.78
SPC98P53540 YPL222C-AYPL222C-A 246 nt10.19□□□□□ -0.78
SPC98P53540 ALG12YNR030W 1656 nt10.18□□□□□ -0.78
SPC98P53540 FUN14YAL008W 597 nt10.16□□□□□ -0.78
SPC98P53540 YJL195CYJL195C 702 nt10.16□□□□□ -0.78
SPC98P53540 DIF1YLR437C 402 nt10.15□□□□□ -0.78
SPC98P53540 YAR028WYAR028W 705 nt10.14□□□□□ -0.79
SPC98P53540 YNR029CYNR029C 1290 nt10.14□□□□□ -0.79
SPC98P53540 ADH1YOL086C 1047 nt10.14□□□□□ -0.79
SPC98P53540 YPI1YFR003C 468 nt10.13□□□□□ -0.79
SPC98P53540 LOT5YKL183W 921 nt10.12□□□□□ -0.79
SPC98P53540 ZTA1YBR046C 1005 nt10.12□□□□□ -0.79
SPC98P53540 GND1YHR183W 1470 nt10.11□□□□□ -0.79
SPC98P53540 YKR005CYKR005C 1578 nt10.11□□□□□ -0.79
SPC98P53540 YGR259CYGR259C 441 nt10.11□□□□□ -0.79
SPC98P53540 ALP1YNL270C 1722 nt10.1□□□□□ -0.79
SPC98P53540 UTR1YJR049C 1593 nt10.1□□□□□ -0.79
SPC98P53540 MTG2YHR168W 1557 nt10.09□□□□□ -0.79
SPC98P53540 AKR2YOR034C 2250 nt10.09□□□□□ -0.79
SPC98P53540 ADH7YCR105W 1086 nt10.08□□□□□ -0.8
SPC98P53540 AAC1YMR056C 930 nt10.06□□□□□ -0.8
SPC98P53540 RPM1RPM1 483 nt10.05□□□□□ -0.8
SPC98P53540 PRP4YPR178W 1398 nt10.02□□□□□ -0.8
SPC98P53540 PAU15YIR041W 375 nt10.02□□□□□ -0.81
SPC98P53540 APT2YDR441C 546 nt10.01□□□□□ -0.81
SPC98P53540 FCY21YER060W 1587 nt10.01□□□□□ -0.81
SPC98P53540 YEL008WYEL008W 381 nt10□□□□□ -0.81
SPC98P53540 SMM1YNR015W 1155 nt10□□□□□ -0.81
SPC98P53540 GPN2YOR262W 1044 nt9.97□□□□□ -0.81
SPC98P53540 DPS1YLL018C 1674 nt9.96□□□□□ -0.81
SPC98P53540 SAM35YHR083W 990 nt9.96□□□□□ -0.82
SPC98P53540 PRM5YIL117C 957 nt9.96□□□□□ -0.82
SPC98P53540 LSB3YFR024C-A 1380 nt9.96□□□□□ -0.82
SPC98P53540 SED1YDR077W 1017 nt9.95□□□□□ -0.82
SPC98P53540 BMT6YLR063W 1098 nt9.95□□□□□ -0.82
SPC98P53540 CPD1YGR247W 720 nt9.93□□□□□ -0.82
SPC98P53540 YER190C-AYER190C-A 576 nt9.92□□□□□ -0.82
SPC98P53540 YGR296C-AYGR296C-A 576 nt9.92□□□□□ -0.82
SPC98P53540 PRY1YJL079C 900 nt9.92□□□□□ -0.82
SPC98P53540 YML133W-AYML133W-A 576 nt9.92□□□□□ -0.82
SPC98P53540 YNL339W-AYNL339W-A 576 nt9.92□□□□□ -0.82
SPC98P53540 YPL283W-AYPL283W-A 576 nt9.92□□□□□ -0.82
SPC98P53540 RIB2YOL066C 1776 nt9.92□□□□□ -0.82
SPC98P53540 UGA4YDL210W 1716 nt9.92□□□□□ -0.82
SPC98P53540 HXT12YIL170W 1374 nt9.88□□□□□ -0.83
SPC98P53540 IRC24YIR036C 792 nt9.88□□□□□ -0.83
SPC98P53540 ESS1YJR017C 513 nt9.87□□□□□ -0.83
SPC98P53540 LIP1YMR298W 453 nt9.87□□□□□ -0.83
SPC98P53540 NAR1YNL240C 1476 nt9.85□□□□□ -0.83
SPC98P53540 VRG4YGL225W 1014 nt9.84□□□□□ -0.83
SPC98P53540 YPL251WYPL251W 303 nt9.84□□□□□ -0.83
SPC98P53540 tS(GCU)LtS(GCU)L 80 nt9.83□□□□□ -0.84
SPC98P53540 DBP1YPL119C 1854 nt9.83□□□□□ -0.84
SPC98P53540 YBL086CYBL086C 1401 nt9.81□□□□□ -0.84
SPC98P53540 YJL055WYJL055W 738 nt9.8□□□□□ -0.84
SPC98P53540 SNF1YDR477W 1902 nt9.79□□□□□ -0.84
SPC98P53540 HXT1YHR094C 1713 nt9.79□□□□□ -0.84
SPC98P53540 ALD4YOR374W 1560 nt9.78□□□□□ -0.84
SPC98P53540 MEP3YPR138C 1470 nt9.77□□□□□ -0.85
SPC98P53540 BRR1YPR057W 1026 nt9.76□□□□□ -0.85
SPC98P53540 LEU9YOR108W 1815 nt9.76□□□□□ -0.85
SPC98P53540 CSM1YCR086W 573 nt9.75□□□□□ -0.85
SPC98P53540 YMR103CYMR103C 363 nt9.75□□□□□ -0.85
SPC98P53540 TOA2YKL058W 369 nt9.73□□□□□ -0.85
SPC98P53540 BIO5YNR056C 1686 nt9.73□□□□□ -0.85
SPC98P53540 HIF1YLL022C 1158 nt9.72□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms