Protein–RNA interactions for Protein: P38998

LYS1, Saccharopine dehydrogenase [NAD(+), L-lysine-forming], yeastyeast

RIP-Chip data

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LYS1P38998 YLR111WYLR111W 333 nt9.51□□□□□ -0.89
LYS1P38998 TOM6YOR045W 186 nt9.51□□□□□ -0.89
LYS1P38998 LSC2YGR244C 1284 nt9.5□□□□□ -0.89
LYS1P38998 UTH1YKR042W 1098 nt9.5□□□□□ -0.89
LYS1P38998 YML089CYML089C 369 nt9.49□□□□□ -0.89
LYS1P38998 HIP1YGR191W 1812 nt9.49□□□□□ -0.89 RIP-Chip
LYS1P38998 RAD23YEL037C 1197 nt9.46□□□□□ -0.9 RIP-Chip
LYS1P38998 PEX2YJL210W 816 nt9.46□□□□□ -0.9 RIP-Chip
LYS1P38998 SDH5YOL071W 489 nt9.46□□□□□ -0.9
LYS1P38998 PRO1YDR300C 1287 nt9.45□□□□□ -0.9
LYS1P38998 SAM1YLR180W 1149 nt9.45□□□□□ -0.9 RIP-Chip
LYS1P38998 TSC10YBR265W 963 nt9.43□□□□□ -0.9
LYS1P38998 NRT1YOR071C 1797 nt9.42□□□□□ -0.9
LYS1P38998 ARP6YLR085C 1317 nt9.42□□□□□ -0.9
LYS1P38998 MET28YIR017C 564 nt9.41□□□□□ -0.9
LYS1P38998 TIF6YPR016C 738 nt9.41□□□□□ -0.9
LYS1P38998 ATG15YCR068W 1563 nt9.4□□□□□ -0.9
LYS1P38998 FUR4YBR021W 1902 nt9.39□□□□□ -0.91 RIP-Chip
LYS1P38998 YGR012WYGR012W 1182 nt9.39□□□□□ -0.91
LYS1P38998 YLR437C-AYLR437C-A 228 nt9.39□□□□□ -0.91
LYS1P38998 RTN2YDL204W 1182 nt9.36□□□□□ -0.91
LYS1P38998 CAB5YDR196C 726 nt9.35□□□□□ -0.91
LYS1P38998 RIB3YDR487C 627 nt9.35□□□□□ -0.91
LYS1P38998 GAP1YKR039W 1809 nt9.35□□□□□ -0.91 RIP-Chip
LYS1P38998 YLR279WYLR279W 390 nt9.33□□□□□ -0.92
LYS1P38998 FIT3YOR383C 615 nt9.33□□□□□ -0.92 RIP-Chip
LYS1P38998 PLB1YMR008C 1995 nt9.31□□□□□ -0.92 RIP-Chip
LYS1P38998 MSB4YOL112W 1479 nt9.27□□□□□ -0.93
LYS1P38998 YPL222C-AYPL222C-A 246 nt9.24□□□□□ -0.93
LYS1P38998 YKR005CYKR005C 1578 nt9.24□□□□□ -0.93 RIP-Chip
LYS1P38998 YGR259CYGR259C 441 nt9.23□□□□□ -0.93
LYS1P38998 DIF1YLR437C 402 nt9.22□□□□□ -0.93 RIP-Chip
LYS1P38998 YAR028WYAR028W 705 nt9.2□□□□□ -0.94
LYS1P38998 UTR1YJR049C 1593 nt9.19□□□□□ -0.94
LYS1P38998 ALP1YNL270C 1722 nt9.19□□□□□ -0.94 RIP-Chip
LYS1P38998 RAD51YER095W 1203 nt9.18□□□□□ -0.94 RIP-Chip
LYS1P38998 FUN14YAL008W 597 nt9.17□□□□□ -0.94
LYS1P38998 HSP60YLR259C 1719 nt9.17□□□□□ -0.94
LYS1P38998 MTG2YHR168W 1557 nt9.16□□□□□ -0.94
LYS1P38998 YPI1YFR003C 468 nt9.16□□□□□ -0.94
LYS1P38998 ADH1YOL086C 1047 nt9.16□□□□□ -0.94
LYS1P38998 STE4YOR212W 1272 nt9.16□□□□□ -0.94
LYS1P38998 GND1YHR183W 1470 nt9.15□□□□□ -0.94
LYS1P38998 PRP4YPR178W 1398 nt9.15□□□□□ -0.94
LYS1P38998 YJL195CYJL195C 702 nt9.15□□□□□ -0.94
LYS1P38998 YLR349WYLR349W 507 nt9.14□□□□□ -0.95
LYS1P38998 ZTA1YBR046C 1005 nt9.14□□□□□ -0.95
LYS1P38998 LOT5YKL183W 921 nt9.13□□□□□ -0.95 RIP-Chip
LYS1P38998 AKR2YOR034C 2250 nt9.12□□□□□ -0.95 RIP-Chip
LYS1P38998 DPS1YLL018C 1674 nt9.1□□□□□ -0.95
LYS1P38998 YNR029CYNR029C 1290 nt9.1□□□□□ -0.95
LYS1P38998 BMT6YLR063W 1098 nt9.09□□□□□ -0.95
LYS1P38998 SAM35YHR083W 990 nt9.08□□□□□ -0.96
LYS1P38998 FCY21YER060W 1587 nt9.07□□□□□ -0.96
LYS1P38998 AAC1YMR056C 930 nt9.06□□□□□ -0.96 RIP-Chip
LYS1P38998 SMM1YNR015W 1155 nt9.06□□□□□ -0.96
LYS1P38998 APT2YDR441C 546 nt9.04□□□□□ -0.96 RIP-Chip
LYS1P38998 PRM5YIL117C 957 nt9.04□□□□□ -0.96
LYS1P38998 IRC24YIR036C 792 nt9.04□□□□□ -0.96 RIP-Chip
LYS1P38998 SED1YDR077W 1017 nt9.03□□□□□ -0.96 RIP-Chip
LYS1P38998 YEL008WYEL008W 381 nt9.03□□□□□ -0.96
LYS1P38998 ADH7YCR105W 1086 nt9.02□□□□□ -0.97
LYS1P38998 YER190C-AYER190C-A 576 nt9.01□□□□□ -0.97
LYS1P38998 YGR296C-AYGR296C-A 576 nt9.01□□□□□ -0.97
LYS1P38998 YML133W-AYML133W-A 576 nt9.01□□□□□ -0.97
LYS1P38998 YNL339W-AYNL339W-A 576 nt9.01□□□□□ -0.97
LYS1P38998 YPL283W-AYPL283W-A 576 nt9.01□□□□□ -0.97
LYS1P38998 PAU15YIR041W 375 nt8.99□□□□□ -0.97
LYS1P38998 BOR1YNL275W 1731 nt8.99□□□□□ -0.97
LYS1P38998 LSB3YFR024C-A 1380 nt8.99□□□□□ -0.97 RIP-Chip
LYS1P38998 RPM1RPM1 483 nt8.98□□□□□ -0.97
LYS1P38998 LIP1YMR298W 453 nt8.97□□□□□ -0.97
LYS1P38998 UGA4YDL210W 1716 nt8.97□□□□□ -0.97 RIP-Chip
LYS1P38998 DBP1YPL119C 1854 nt8.96□□□□□ -0.97
LYS1P38998 PRY1YJL079C 900 nt8.96□□□□□ -0.98 RIP-Chip
LYS1P38998 HXT12YIL170W 1374 nt8.96□□□□□ -0.98
LYS1P38998 RIB2YOL066C 1776 nt8.95□□□□□ -0.98
LYS1P38998 SNF1YDR477W 1902 nt8.94□□□□□ -0.98 RIP-Chip
LYS1P38998 GPN2YOR262W 1044 nt8.94□□□□□ -0.98
LYS1P38998 CPD1YGR247W 720 nt8.93□□□□□ -0.98
LYS1P38998 ALD4YOR374W 1560 nt8.93□□□□□ -0.98
LYS1P38998 YPL251WYPL251W 303 nt8.91□□□□□ -0.98
LYS1P38998 HXT1YHR094C 1713 nt8.9□□□□□ -0.98
LYS1P38998 YBL086CYBL086C 1401 nt8.89□□□□□ -0.99 RIP-Chip
LYS1P38998 LEU9YOR108W 1815 nt8.89□□□□□ -0.99
LYS1P38998 VRG4YGL225W 1014 nt8.89□□□□□ -0.99 RIP-Chip
LYS1P38998 HIF1YLL022C 1158 nt8.87□□□□□ -0.99 RIP-Chip
LYS1P38998 BRR1YPR057W 1026 nt8.87□□□□□ -0.99
LYS1P38998 ESS1YJR017C 513 nt8.86□□□□□ -0.99
LYS1P38998 MEP3YPR138C 1470 nt8.85□□□□□ -0.99
LYS1P38998 CSM1YCR086W 573 nt8.84□□□□□ -0.99
LYS1P38998 YJL055WYJL055W 738 nt8.84□□□□□ -0.99
LYS1P38998 YMR103CYMR103C 363 nt8.84□□□□□ -0.99
LYS1P38998 TOA2YKL058W 369 nt8.83□□□□□ -1
LYS1P38998 tS(GCU)LtS(GCU)L 80 nt8.82□□□□□ -1
LYS1P38998 UME6YDR207C 2511 nt8.8□□□□□ -1
LYS1P38998 CCT5YJR064W 1689 nt8.79□□□□□ -1
LYS1P38998 LSB5YCL034W 1065 nt8.78□□□□□ -1 RIP-Chip
LYS1P38998 SSN3YPL042C 1668 nt8.78□□□□□ -1 RIP-Chip
LYS1P38998 SHY1YGR112W 1170 nt8.77□□□□□ -1.01 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms