Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 ARP6YLR085C 1317 nt9.69□□□□□ -0.86
TDA11P38854 YNL115CYNL115C 1935 nt9.69□□□□□ -0.86
TDA11P38854 SFP1YLR403W 2052 nt9.67□□□□□ -0.86
TDA11P38854 YJL067WYJL067W 351 nt9.63□□□□□ -0.87
TDA11P38854 ILV3YJR016C 1758 nt9.61□□□□□ -0.87
TDA11P38854 NBP35YGL091C 987 nt9.61□□□□□ -0.87
TDA11P38854 NAT4YMR069W 858 nt9.61□□□□□ -0.87
TDA11P38854 UTR1YJR049C 1593 nt9.6□□□□□ -0.87
TDA11P38854 YNL024CYNL024C 741 nt9.6□□□□□ -0.87
TDA11P38854 VPS75YNL246W 795 nt9.6□□□□□ -0.87
TDA11P38854 DAT1YML113W 747 nt9.59□□□□□ -0.87
TDA11P38854 YMR209CYMR209C 1374 nt9.59□□□□□ -0.87
TDA11P38854 MIR1YJR077C 936 nt9.58□□□□□ -0.88
TDA11P38854 SHM2YLR058C 1410 nt9.56□□□□□ -0.88
TDA11P38854 HMG2YLR450W 3138 nt9.55□□□□□ -0.88
TDA11P38854 MSF1YPR047W 1410 nt9.55□□□□□ -0.88
TDA11P38854 YOR325WYOR325W 474 nt9.53□□□□□ -0.88
TDA11P38854 TPO4YOR273C 1980 nt9.52□□□□□ -0.89
TDA11P38854 THI74YDR438W 1113 nt9.52□□□□□ -0.89
TDA11P38854 SAM35YHR083W 990 nt9.52□□□□□ -0.89
TDA11P38854 UGP1YKL035W 1500 nt9.51□□□□□ -0.89
TDA11P38854 HIS2YFR025C 1008 nt9.51□□□□□ -0.89
TDA11P38854 UGA4YDL210W 1716 nt9.51□□□□□ -0.89
TDA11P38854 YCR102CYCR102C 1107 nt9.5□□□□□ -0.89
TDA11P38854 COQ8YGL119W 1506 nt9.5□□□□□ -0.89
TDA11P38854 NPP1YCR026C 2229 nt9.46□□□□□ -0.89
TDA11P38854 YIL100C-AYIL100C-A 339 nt9.46□□□□□ -0.9
TDA11P38854 NIT1YIL164C 600 nt9.46□□□□□ -0.9
TDA11P38854 GAP1YKR039W 1809 nt9.45□□□□□ -0.9
TDA11P38854 YHL008CYHL008C 1884 nt9.45□□□□□ -0.9
TDA11P38854 TIM17YJL143W 477 nt9.43□□□□□ -0.9
TDA11P38854 ARO8YGL202W 1503 nt9.42□□□□□ -0.9
TDA11P38854 OPI10YOL032W 741 nt9.42□□□□□ -0.9
TDA11P38854 DBP1YPL119C 1854 nt9.42□□□□□ -0.9
TDA11P38854 PSD1YNL169C 1503 nt9.4□□□□□ -0.91
TDA11P38854 LSC2YGR244C 1284 nt9.38□□□□□ -0.91
TDA11P38854 HXT1YHR094C 1713 nt9.38□□□□□ -0.91
TDA11P38854 SGA1YIL099W 1650 nt9.38□□□□□ -0.91
TDA11P38854 UBA4YHR111W 1323 nt9.37□□□□□ -0.91
TDA11P38854 YMR244WYMR244W 1068 nt9.37□□□□□ -0.91
TDA11P38854 KES1YPL145C 1305 nt9.36□□□□□ -0.91
TDA11P38854 SHY1YGR112W 1170 nt9.36□□□□□ -0.91
TDA11P38854 SGT2YOR007C 1041 nt9.35□□□□□ -0.91
TDA11P38854 CCT2YIL142W 1584 nt9.34□□□□□ -0.91
TDA11P38854 YGL034CYGL034C 366 nt9.34□□□□□ -0.91
TDA11P38854 SHB17YKR043C 816 nt9.34□□□□□ -0.91
TDA11P38854 PAU7YAR020C 168 nt9.34□□□□□ -0.91
TDA11P38854 ZAP1YJL056C 2643 nt9.34□□□□□ -0.91
TDA11P38854 YDR010CYDR010C 333 nt9.32□□□□□ -0.92
TDA11P38854 TIR3YIL011W 810 nt9.31□□□□□ -0.92
TDA11P38854 PRO1YDR300C 1287 nt9.3□□□□□ -0.92
TDA11P38854 CYT1YOR065W 930 nt9.3□□□□□ -0.92
TDA11P38854 BET2YPR176C 978 nt9.3□□□□□ -0.92
TDA11P38854 LSB6YJL100W 1824 nt9.3□□□□□ -0.92
TDA11P38854 RSC8YFR037C 1674 nt9.29□□□□□ -0.92
TDA11P38854 DMA2YNL116W 1569 nt9.29□□□□□ -0.92
TDA11P38854 CWC15YDR163W 528 nt9.29□□□□□ -0.92
TDA11P38854 GLR1YPL091W 1452 nt9.28□□□□□ -0.92
TDA11P38854 YSR3YKR053C 1215 nt9.27□□□□□ -0.93
TDA11P38854 SHH4YLR164W 507 nt9.26□□□□□ -0.93
TDA11P38854 DIF1YLR437C 402 nt9.26□□□□□ -0.93
TDA11P38854 URA8YJR103W 1737 nt9.25□□□□□ -0.93
TDA11P38854 RET2YFR051C 1641 nt9.25□□□□□ -0.93
TDA11P38854 MRP20YDR405W 792 nt9.25□□□□□ -0.93
TDA11P38854 HXK1YFR053C 1458 nt9.23□□□□□ -0.93
TDA11P38854 URA6YKL024C 615 nt9.23□□□□□ -0.93
TDA11P38854 YBL086CYBL086C 1401 nt9.22□□□□□ -0.93
TDA11P38854 POM34YLR018C 900 nt9.22□□□□□ -0.93
TDA11P38854 XYL2YLR070C 1071 nt9.22□□□□□ -0.93
TDA11P38854 YHR218WYHR218W 1812 nt9.21□□□□□ -0.93
TDA11P38854 ATG15YCR068W 1563 nt9.21□□□□□ -0.93
TDA11P38854 ALD5YER073W 1563 nt9.2□□□□□ -0.94
TDA11P38854 YCR087WYCR087W 516 nt9.2□□□□□ -0.94
TDA11P38854 RPM1RPM1 483 nt9.2□□□□□ -0.94
TDA11P38854 RBG2YGR173W 1107 nt9.19□□□□□ -0.94
TDA11P38854 UFO1YML088W 2007 nt9.18□□□□□ -0.94
TDA11P38854 ODC1YPL134C 933 nt9.18□□□□□ -0.94
TDA11P38854 PHO89YBR296C 1725 nt9.17□□□□□ -0.94
TDA11P38854 AIM45YPR004C 1035 nt9.17□□□□□ -0.94
TDA11P38854 RBG1YAL036C 1110 nt9.16□□□□□ -0.94
TDA11P38854 LIP1YMR298W 453 nt9.15□□□□□ -0.94
TDA11P38854 ZTA1YBR046C 1005 nt9.15□□□□□ -0.94
TDA11P38854 YML089CYML089C 369 nt9.14□□□□□ -0.95
TDA11P38854 QDR2YIL121W 1629 nt9.13□□□□□ -0.95
TDA11P38854 SSL2YIL143C 2532 nt9.11□□□□□ -0.95
TDA11P38854 ACH1YBL015W 1581 nt9.11□□□□□ -0.95
TDA11P38854 SED1YDR077W 1017 nt9.1□□□□□ -0.95
TDA11P38854 YER190C-AYER190C-A 576 nt9.1□□□□□ -0.95
TDA11P38854 YGR296C-AYGR296C-A 576 nt9.1□□□□□ -0.95
TDA11P38854 YML133W-AYML133W-A 576 nt9.1□□□□□ -0.95
TDA11P38854 YMR226CYMR226C 804 nt9.1□□□□□ -0.95
TDA11P38854 YNL339W-AYNL339W-A 576 nt9.1□□□□□ -0.95
TDA11P38854 COQ2YNR041C 1119 nt9.1□□□□□ -0.95
TDA11P38854 YPL283W-AYPL283W-A 576 nt9.1□□□□□ -0.95
TDA11P38854 SFA1YDL168W 1161 nt9.09□□□□□ -0.95
TDA11P38854 OYE3YPL171C 1203 nt9.09□□□□□ -0.95
TDA11P38854 LEU9YOR108W 1815 nt9.09□□□□□ -0.95
TDA11P38854 PET8YNL003C 855 nt9.08□□□□□ -0.96
TDA11P38854 GID8YMR135C 1368 nt9.08□□□□□ -0.96
TDA11P38854 GID7YCL039W 2238 nt9.07□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms