Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 DUT1YBR252W 444 nt8.07□□□□□ -1.12
RPB9P27999 CCA1YER168C 1641 nt8.07□□□□□ -1.12
RPB9P27999 YGR012WYGR012W 1182 nt8.06□□□□□ -1.12
RPB9P27999 NRT1YOR071C 1797 nt8.05□□□□□ -1.12
RPB9P27999 RAD51YER095W 1203 nt8.05□□□□□ -1.12
RPB9P27999 RPM1RPM1 483 nt8.05□□□□□ -1.12
RPB9P27999 TOM6YOR045W 186 nt8.05□□□□□ -1.12
RPB9P27999 HIP1YGR191W 1812 nt8.05□□□□□ -1.12
RPB9P27999 LSC2YGR244C 1284 nt8.04□□□□□ -1.12
RPB9P27999 SHH4YLR164W 507 nt8.04□□□□□ -1.12
RPB9P27999 POM34YLR018C 900 nt8.03□□□□□ -1.12
RPB9P27999 MET28YIR017C 564 nt8.02□□□□□ -1.13
RPB9P27999 FUN14YAL008W 597 nt8.02□□□□□ -1.13
RPB9P27999 PEX2YJL210W 816 nt8.02□□□□□ -1.13
RPB9P27999 YLR349WYLR349W 507 nt8.01□□□□□ -1.13
RPB9P27999 YNR029CYNR029C 1290 nt8.01□□□□□ -1.13
RPB9P27999 YJL195CYJL195C 702 nt7.99□□□□□ -1.13
RPB9P27999 DUS1YML080W 1272 nt7.99□□□□□ -1.13
RPB9P27999 FIT3YOR383C 615 nt7.99□□□□□ -1.13
RPB9P27999 ADH7YCR105W 1086 nt7.97□□□□□ -1.13
RPB9P27999 YPL222C-AYPL222C-A 246 nt7.97□□□□□ -1.13
RPB9P27999 PRO1YDR300C 1287 nt7.96□□□□□ -1.14
RPB9P27999 YLR279WYLR279W 390 nt7.96□□□□□ -1.14
RPB9P27999 TIF6YPR016C 738 nt7.96□□□□□ -1.14
RPB9P27999 SWE1YJL187C 2460 nt7.95□□□□□ -1.14
RPB9P27999 CAB5YDR196C 726 nt7.95□□□□□ -1.14
RPB9P27999 AQY2YLL052C 450 nt7.95□□□□□ -1.14
RPB9P27999 ATG15YCR068W 1563 nt7.95□□□□□ -1.14
RPB9P27999 YPI1YFR003C 468 nt7.94□□□□□ -1.14
RPB9P27999 STR3YGL184C 1398 nt7.94□□□□□ -1.14
RPB9P27999 PAU15YIR041W 375 nt7.93□□□□□ -1.14
RPB9P27999 ADH1YOL086C 1047 nt7.92□□□□□ -1.14
RPB9P27999 YCL074WYCL074W 927 nt7.9□□□□□ -1.14
RPB9P27999 MSB4YOL112W 1479 nt7.89□□□□□ -1.15
RPB9P27999 ARP6YLR085C 1317 nt7.88□□□□□ -1.15
RPB9P27999 YEL008WYEL008W 381 nt7.88□□□□□ -1.15
RPB9P27999 RDN18-1RDN18-1 1800 nt7.86□□□□□ -1.15
RPB9P27999 RDN18-2RDN18-2 1800 nt7.86□□□□□ -1.15
RPB9P27999 GND1YHR183W 1470 nt7.86□□□□□ -1.15
RPB9P27999 CPD1YGR247W 720 nt7.85□□□□□ -1.15
RPB9P27999 LOT5YKL183W 921 nt7.85□□□□□ -1.15
RPB9P27999 GAP1YKR039W 1809 nt7.85□□□□□ -1.15
RPB9P27999 MCH5YOR306C 1566 nt7.84□□□□□ -1.15
RPB9P27999 GPN2YOR262W 1044 nt7.83□□□□□ -1.16
RPB9P27999 BOR1YNL275W 1731 nt7.82□□□□□ -1.16
RPB9P27999 RTN2YDL204W 1182 nt7.81□□□□□ -1.16
RPB9P27999 ESS1YJR017C 513 nt7.81□□□□□ -1.16
RPB9P27999 tS(GCU)LtS(GCU)L 80 nt7.8□□□□□ -1.16
RPB9P27999 ALP1YNL270C 1722 nt7.8□□□□□ -1.16
RPB9P27999 YAR028WYAR028W 705 nt7.78□□□□□ -1.16
RPB9P27999 AAC1YMR056C 930 nt7.78□□□□□ -1.16
RPB9P27999 APT2YDR441C 546 nt7.74□□□□□ -1.17
RPB9P27999 NAP1YKR048C 1254 nt7.74□□□□□ -1.17
RPB9P27999 DIF1YLR437C 402 nt7.74□□□□□ -1.17
RPB9P27999 PLB1YMR008C 1995 nt7.73□□□□□ -1.17
RPB9P27999 SMM1YNR015W 1155 nt7.73□□□□□ -1.17
RPB9P27999 LSB3YFR024C-A 1380 nt7.72□□□□□ -1.17
RPB9P27999 AKR2YOR034C 2250 nt7.72□□□□□ -1.17
RPB9P27999 FCY21YER060W 1587 nt7.71□□□□□ -1.18
RPB9P27999 MTG2YHR168W 1557 nt7.71□□□□□ -1.18
RPB9P27999 ZTA1YBR046C 1005 nt7.69□□□□□ -1.18
RPB9P27999 SEN2YLR105C 1134 nt7.68□□□□□ -1.18
RPB9P27999 FUR4YBR021W 1902 nt7.67□□□□□ -1.18
RPB9P27999 RIB2YOL066C 1776 nt7.66□□□□□ -1.18
RPB9P27999 SAM35YHR083W 990 nt7.66□□□□□ -1.18
RPB9P27999 HXT12YIL170W 1374 nt7.66□□□□□ -1.18
RPB9P27999 UTR1YJR049C 1593 nt7.64□□□□□ -1.19
RPB9P27999 VRG4YGL225W 1014 nt7.62□□□□□ -1.19
RPB9P27999 PRY1YJL079C 900 nt7.62□□□□□ -1.19
RPB9P27999 PUP1YOR157C 786 nt7.62□□□□□ -1.19
RPB9P27999 SED1YDR077W 1017 nt7.61□□□□□ -1.19
RPB9P27999 YGR259CYGR259C 441 nt7.6□□□□□ -1.19
RPB9P27999 STP3YLR375W 1032 nt7.6□□□□□ -1.19
RPB9P27999 YBR232CYBR232C 360 nt7.59□□□□□ -1.19
RPB9P27999 PAU5YFL020C 369 nt7.58□□□□□ -1.2
RPB9P27999 PGC1YPL206C 966 nt7.58□□□□□ -1.2
RPB9P27999 YKR005CYKR005C 1578 nt7.57□□□□□ -1.2
RPB9P27999 ALD4YOR374W 1560 nt7.55□□□□□ -1.2
RPB9P27999 CCT5YJR064W 1689 nt7.55□□□□□ -1.2
RPB9P27999 UGA4YDL210W 1716 nt7.55□□□□□ -1.2
RPB9P27999 LIP1YMR298W 453 nt7.54□□□□□ -1.2
RPB9P27999 TAF13YML098W 504 nt7.53□□□□□ -1.2
RPB9P27999 YER190C-AYER190C-A 576 nt7.52□□□□□ -1.21
RPB9P27999 YGR296C-AYGR296C-A 576 nt7.52□□□□□ -1.21
RPB9P27999 TIM44YIL022W 1296 nt7.52□□□□□ -1.21
RPB9P27999 YML133W-AYML133W-A 576 nt7.52□□□□□ -1.21
RPB9P27999 YNL339W-AYNL339W-A 576 nt7.52□□□□□ -1.21
RPB9P27999 YPL283W-AYPL283W-A 576 nt7.52□□□□□ -1.21
RPB9P27999 ALG12YNR030W 1656 nt7.51□□□□□ -1.21
RPB9P27999 YJL055WYJL055W 738 nt7.51□□□□□ -1.21
RPB9P27999 YJL064WYJL064W 396 nt7.51□□□□□ -1.21
RPB9P27999 BMT6YLR063W 1098 nt7.5□□□□□ -1.21
RPB9P27999 PAU19YMR325W 375 nt7.5□□□□□ -1.21
RPB9P27999 LSB5YCL034W 1065 nt7.5□□□□□ -1.21
RPB9P27999 PRP4YPR178W 1398 nt7.47□□□□□ -1.21
RPB9P27999 PRM5YIL117C 957 nt7.47□□□□□ -1.21
RPB9P27999 RIB7YBR153W 735 nt7.47□□□□□ -1.21
RPB9P27999 THI72YOR192C 1800 nt7.47□□□□□ -1.21
RPB9P27999 MEP3YPR138C 1470 nt7.45□□□□□ -1.22
RPB9P27999 HSP60YLR259C 1719 nt7.45□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 99.1 ms