Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00474Q9P2X8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 BX842568.3-201ENST00000418104 571 ntBASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 AL355001.2-201ENST00000620617 1191 ntBASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00474Q9P2X8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00474Q9P2X8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00474Q9P2X8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LINC00474Q9P2X8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
LINC00474Q9P2X8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00474Q9P2X8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
LINC00474Q9P2X8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LINC00474Q9P2X8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 AP005435.1-201ENST00000529293 1178 ntBASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 AC024257.2-201ENST00000549699 147 ntBASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 AC027682.1-201ENST00000562846 899 ntBASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 MIR4767-201ENST00000582827 78 ntBASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 AC233992.3-201ENST00000607491 485 ntBASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00474Q9P2X8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 LINC01960-201ENST00000563759 1884 ntBASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00474Q9P2X8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14□□□□□ -0.17
LINC00474Q9P2X8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14□□□□□ -0.17
LINC00474Q9P2X8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC00474Q9P2X8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
LINC00474Q9P2X8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms