Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SDF2Q99470 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SDF2Q99470 UNC93B3-201ENST00000308076 687 ntBASIC20.09■□□□□ 0.81
SDF2Q99470 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDF2Q99470 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SDF2Q99470 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.09■□□□□ 0.81
SDF2Q99470 AC087239.1-201ENST00000622671 572 ntBASIC20.09■□□□□ 0.81
SDF2Q99470 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SDF2Q99470 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SDF2Q99470 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SDF2Q99470 AC008406.3-201ENST00000620001 1374 ntBASIC20.08■□□□□ 0.81
SDF2Q99470 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SDF2Q99470 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SDF2Q99470 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SDF2Q99470 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SDF2Q99470 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SDF2Q99470 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SDF2Q99470 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SDF2Q99470 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.08■□□□□ 0.81
SDF2Q99470 SLC47A1P1-202ENST00000449666 945 ntBASIC20.08■□□□□ 0.81
SDF2Q99470 AC010141.3-201ENST00000456659 717 ntBASIC20.08■□□□□ 0.81
SDF2Q99470 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.08■□□□□ 0.81
SDF2Q99470 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SDF2Q99470 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.08■□□□□ 0.81
SDF2Q99470 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SDF2Q99470 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.08■□□□□ 0.81
SDF2Q99470 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SDF2Q99470 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.08■□□□□ 0.8
SDF2Q99470 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SDF2Q99470 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SDF2Q99470 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SDF2Q99470 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDF2Q99470 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SDF2Q99470 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDF2Q99470 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.07■□□□□ 0.8
SDF2Q99470 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SDF2Q99470 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SDF2Q99470 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SDF2Q99470 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SDF2Q99470 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SDF2Q99470 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDF2Q99470 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDF2Q99470 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SDF2Q99470 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDF2Q99470 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.06■□□□□ 0.8
SDF2Q99470 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.06■□□□□ 0.8
SDF2Q99470 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.06■□□□□ 0.8
SDF2Q99470 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.06■□□□□ 0.8
SDF2Q99470 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.06■□□□□ 0.8
SDF2Q99470 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.06■□□□□ 0.8
SDF2Q99470 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDF2Q99470 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDF2Q99470 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDF2Q99470 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.05■□□□□ 0.8
SDF2Q99470 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SDF2Q99470 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDF2Q99470 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.05■□□□□ 0.8
SDF2Q99470 AP005435.1-201ENST00000529293 1178 ntBASIC20.05■□□□□ 0.8
SDF2Q99470 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.05■□□□□ 0.8
SDF2Q99470 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDF2Q99470 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDF2Q99470 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDF2Q99470 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.05■□□□□ 0.8
SDF2Q99470 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SDF2Q99470 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDF2Q99470 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.05■□□□□ 0.8
SDF2Q99470 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.04■□□□□ 0.8
SDF2Q99470 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDF2Q99470 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.04■□□□□ 0.8
SDF2Q99470 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDF2Q99470 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDF2Q99470 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDF2Q99470 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDF2Q99470 OXCT2P1-201ENST00000447263 1535 ntBASIC20.04■□□□□ 0.8
SDF2Q99470 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.04■□□□□ 0.8
SDF2Q99470 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SDF2Q99470 AC024257.2-201ENST00000549699 147 ntBASIC20.04■□□□□ 0.8
SDF2Q99470 MIR4767-201ENST00000582827 78 ntBASIC20.04■□□□□ 0.8
SDF2Q99470 AL136162.1-201ENST00000607711 1078 ntBASIC20.04■□□□□ 0.8
SDF2Q99470 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SDF2Q99470 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDF2Q99470 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDF2Q99470 OR7E47P-201ENST00000546390 1422 ntBASIC20.03■□□□□ 0.8
SDF2Q99470 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDF2Q99470 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SDF2Q99470 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SDF2Q99470 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDF2Q99470 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.03■□□□□ 0.8
SDF2Q99470 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.03■□□□□ 0.8
SDF2Q99470 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SDF2Q99470 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDF2Q99470 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDF2Q99470 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.03■□□□□ 0.8
SDF2Q99470 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SDF2Q99470 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDF2Q99470 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.03■□□□□ 0.8
SDF2Q99470 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.02■□□□□ 0.8
SDF2Q99470 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDF2Q99470 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SDF2Q99470 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 878.5 ms