Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 PEP4YPL154C 1218 nt4.12□□□□□ -1.75
TY2A-FP0CX61 OM14YBR230C 405 nt4.12□□□□□ -1.75
TY2A-FP0CX61 MTH1YDR277C 1302 nt4.12□□□□□ -1.75
TY2A-FP0CX61 PEP5YMR231W 3090 nt4.12□□□□□ -1.75
TY2A-FP0CX61 SST2YLR452C 2097 nt4.12□□□□□ -1.75
TY2A-FP0CX61 TDA6YPR157W 1404 nt4.12□□□□□ -1.75
TY2A-FP0CX61 YIL001WYIL001W 1542 nt4.11□□□□□ -1.75
TY2A-FP0CX61 YDR355CYDR355C 303 nt4.11□□□□□ -1.75
TY2A-FP0CX61 SPO73YER046W 432 nt4.11□□□□□ -1.75
TY2A-FP0CX61 YFL051CYFL051C 483 nt4.11□□□□□ -1.75
TY2A-FP0CX61 YGR016WYGR016W 573 nt4.11□□□□□ -1.75
TY2A-FP0CX61 YGR026WYGR026W 837 nt4.11□□□□□ -1.75
TY2A-FP0CX61 SRB5YGR104C 924 nt4.11□□□□□ -1.75
TY2A-FP0CX61 CAP2YIL034C 864 nt4.11□□□□□ -1.75
TY2A-FP0CX61 YIL156W-AYIL156W-A 402 nt4.11□□□□□ -1.75
TY2A-FP0CX61 FOL3YMR113W 1284 nt4.11□□□□□ -1.75
TY2A-FP0CX61 TIF5YPR041W 1218 nt4.11□□□□□ -1.75
TY2A-FP0CX61 NCE102YPR149W 522 nt4.11□□□□□ -1.75
TY2A-FP0CX61 YBR096WYBR096W 693 nt4.11□□□□□ -1.75
TY2A-FP0CX61 MRPL27YBR282W 441 nt4.11□□□□□ -1.75
TY2A-FP0CX61 UBP6YFR010W 1500 nt4.11□□□□□ -1.75
TY2A-FP0CX61 BI3Q0115 1554 nt4.1□□□□□ -1.75
TY2A-FP0CX61 SDS23YGL056C 1584 nt4.1□□□□□ -1.75
TY2A-FP0CX61 MDR1YGR100W 2853 nt4.1□□□□□ -1.75
TY2A-FP0CX61 KAP114YGL241W 3015 nt4.1□□□□□ -1.75
TY2A-FP0CX61 NOP6YDL213C 678 nt4.1□□□□□ -1.75
TY2A-FP0CX61 DPB4YDR121W 591 nt4.1□□□□□ -1.75
TY2A-FP0CX61 BCP1YDR361C 852 nt4.1□□□□□ -1.75
TY2A-FP0CX61 YEL050W-AYEL050W-A 192 nt4.1□□□□□ -1.75
TY2A-FP0CX61 RPL22BYFL034C-A 369 nt4.1□□□□□ -1.75
TY2A-FP0CX61 VMA7YGR020C 357 nt4.1□□□□□ -1.75
TY2A-FP0CX61 GTT1YIR038C 705 nt4.1□□□□□ -1.75
TY2A-FP0CX61 YJR128WYJR128W 360 nt4.1□□□□□ -1.75
TY2A-FP0CX61 RPC25YKL144C 639 nt4.1□□□□□ -1.75
TY2A-FP0CX61 YMR099CYMR099C 894 nt4.1□□□□□ -1.75
TY2A-FP0CX61 YNR071CYNR071C 1029 nt4.1□□□□□ -1.75
TY2A-FP0CX61 COM2YER130C 1332 nt4.1□□□□□ -1.75
TY2A-FP0CX61 JHD2YJR119C 2187 nt4.1□□□□□ -1.75
TY2A-FP0CX61 GCR1YPL075W 2358 nt4.1□□□□□ -1.75
TY2A-FP0CX61 PHM7YOL084W 2976 nt4.09□□□□□ -1.75
TY2A-FP0CX61 GRX3YDR098C 858 nt4.09□□□□□ -1.75
TY2A-FP0CX61 YPR1YDR368W 939 nt4.09□□□□□ -1.75
TY2A-FP0CX61 LYS5YGL154C 819 nt4.09□□□□□ -1.75
TY2A-FP0CX61 BUD13YGL174W 801 nt4.09□□□□□ -1.75
TY2A-FP0CX61 LOH1YJL038C 660 nt4.09□□□□□ -1.75
TY2A-FP0CX61 GCD14YJL125C 1152 nt4.09□□□□□ -1.75
TY2A-FP0CX61 ERG20YJL167W 1059 nt4.09□□□□□ -1.75
TY2A-FP0CX61 FMP46YKR049C 402 nt4.09□□□□□ -1.75
TY2A-FP0CX61 FMP41YNL168C 780 nt4.09□□□□□ -1.75
TY2A-FP0CX61 POP3YNL282W 588 nt4.09□□□□□ -1.75
TY2A-FP0CX61 YOR186WYOR186W 435 nt4.09□□□□□ -1.75
TY2A-FP0CX61 YOR379CYOR379C 339 nt4.09□□□□□ -1.75
TY2A-FP0CX61 SUA7YPR086W 1038 nt4.09□□□□□ -1.75
TY2A-FP0CX61 PRP3YDR473C 1410 nt4.09□□□□□ -1.75
TY2A-FP0CX61 RAD52YML032C 1416 nt4.09□□□□□ -1.75
TY2A-FP0CX61 PRP11YDL043C 801 nt4.08□□□□□ -1.76
TY2A-FP0CX61 UBC9YDL064W 474 nt4.08□□□□□ -1.76
TY2A-FP0CX61 MSS4YDR208W 2340 nt4.08□□□□□ -1.76
TY2A-FP0CX61 SRB7YDR308C 423 nt4.08□□□□□ -1.76
TY2A-FP0CX61 DCV1YFR012W 609 nt4.08□□□□□ -1.76
TY2A-FP0CX61 DSN1YIR010W 1731 nt4.08□□□□□ -1.76
TY2A-FP0CX61 YJL218WYJL218W 591 nt4.08□□□□□ -1.76
TY2A-FP0CX61 MET14YKL001C 609 nt4.08□□□□□ -1.76
TY2A-FP0CX61 AUR1YKL004W 1206 nt4.08□□□□□ -1.76
TY2A-FP0CX61 CDC42YLR229C 576 nt4.08□□□□□ -1.76
TY2A-FP0CX61 YML119WYML119W 1074 nt4.08□□□□□ -1.76
TY2A-FP0CX61 YOL107WYOL107W 1029 nt4.08□□□□□ -1.76
TY2A-FP0CX61 YDR131CYDR131C 1671 nt4.07□□□□□ -1.76
TY2A-FP0CX61 ALO1YML086C 1581 nt4.07□□□□□ -1.76
TY2A-FP0CX61 ORC4YPR162C 1590 nt4.07□□□□□ -1.76
TY2A-FP0CX61 PUB1YNL016W 1362 nt4.07□□□□□ -1.76
TY2A-FP0CX61 TSC13YDL015C 933 nt4.07□□□□□ -1.76
TY2A-FP0CX61 DET1YDR051C 1005 nt4.07□□□□□ -1.76
TY2A-FP0CX61 RPN9YDR427W 1182 nt4.07□□□□□ -1.76
TY2A-FP0CX61 YEL010WYEL010W 351 nt4.07□□□□□ -1.76
TY2A-FP0CX61 TDA10YGR205W 873 nt4.07□□□□□ -1.76
TY2A-FP0CX61 RSM27YGR215W 333 nt4.07□□□□□ -1.76
TY2A-FP0CX61 YAR030CYAR030C 342 nt4.07□□□□□ -1.76
TY2A-FP0CX61 YLR407WYLR407W 687 nt4.07□□□□□ -1.76
TY2A-FP0CX61 YMR158C-AYMR158C-A 138 nt4.07□□□□□ -1.76
TY2A-FP0CX61 FLC1YPL221W 2382 nt4.07□□□□□ -1.76
TY2A-FP0CX61 MNR2YKL064W 2910 nt4.07□□□□□ -1.76
TY2A-FP0CX61 CUE3YGL110C 1875 nt4.07□□□□□ -1.76
TY2A-FP0CX61 LYP1YNL268W 1836 nt4.07□□□□□ -1.76
TY2A-FP0CX61 FOX2YKR009C 2703 nt4.07□□□□□ -1.76
TY2A-FP0CX61 CTM1YHR109W 1758 nt4.07□□□□□ -1.76
TY2A-FP0CX61 YPL260WYPL260W 1656 nt4.06□□□□□ -1.76
TY2A-FP0CX61 STD1YOR047C 1335 nt4.06□□□□□ -1.76
TY2A-FP0CX61 YGL204CYGL204C 306 nt4.06□□□□□ -1.76
TY2A-FP0CX61 tQ(UUG)CtQ(UUG)C 72 nt4.06□□□□□ -1.76
TY2A-FP0CX61 tQ(UUG)D1tQ(UUG)D1 72 nt4.06□□□□□ -1.76
TY2A-FP0CX61 tQ(UUG)D2tQ(UUG)D2 72 nt4.06□□□□□ -1.76
TY2A-FP0CX61 tQ(UUG)D3tQ(UUG)D3 72 nt4.06□□□□□ -1.76
TY2A-FP0CX61 tQ(UUG)E1tQ(UUG)E1 72 nt4.06□□□□□ -1.76
TY2A-FP0CX61 tQ(UUG)HtQ(UUG)H 72 nt4.06□□□□□ -1.76
TY2A-FP0CX61 tQ(UUG)LtQ(UUG)L 72 nt4.06□□□□□ -1.76
TY2A-FP0CX61 YVH1YIR026C 1095 nt4.06□□□□□ -1.76
TY2A-FP0CX61 BAT2YJR148W 1131 nt4.06□□□□□ -1.76
TY2A-FP0CX61 CNB1YKL190W 528 nt4.06□□□□□ -1.76
TY2A-FP0CX61 SRT1YMR101C 1032 nt4.06□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 32.3 ms