Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 IGHV3-19-201ENST00000521488 291 ntBASIC21.54■■□□□ 1.04
CAPNS1P04632 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.54■■□□□ 1.04
CAPNS1P04632 KRT18P61-201ENST00000585825 1298 ntBASIC21.54■■□□□ 1.04
CAPNS1P04632 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPNS1P04632 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPNS1P04632 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CAPNS1P04632 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPNS1P04632 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CAPNS1P04632 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CAPNS1P04632 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CAPNS1P04632 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.53■■□□□ 1.04
CAPNS1P04632 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.53■■□□□ 1.04
CAPNS1P04632 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 AC131274.2-201ENST00000580697 1507 ntBASIC21.53■■□□□ 1.04
CAPNS1P04632 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CAPNS1P04632 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CAPNS1P04632 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPNS1P04632 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CAPNS1P04632 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPNS1P04632 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.52■■□□□ 1.04
CAPNS1P04632 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPNS1P04632 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPNS1P04632 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.52■■□□□ 1.04
CAPNS1P04632 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CAPNS1P04632 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.52■■□□□ 1.04
CAPNS1P04632 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CAPNS1P04632 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CAPNS1P04632 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPNS1P04632 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CAPNS1P04632 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPNS1P04632 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
CAPNS1P04632 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPNS1P04632 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPNS1P04632 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPNS1P04632 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPNS1P04632 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPNS1P04632 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPNS1P04632 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.51■■□□□ 1.03
CAPNS1P04632 AC026185.1-201ENST00000445748 174 ntBASIC21.51■■□□□ 1.03
CAPNS1P04632 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.51■■□□□ 1.03
CAPNS1P04632 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.51■■□□□ 1.03
CAPNS1P04632 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CAPNS1P04632 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CAPNS1P04632 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPNS1P04632 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CAPNS1P04632 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPNS1P04632 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.5■■□□□ 1.03
CAPNS1P04632 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPNS1P04632 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPNS1P04632 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.5■■□□□ 1.03
CAPNS1P04632 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CAPNS1P04632 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.5■■□□□ 1.03
CAPNS1P04632 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.5■■□□□ 1.03
CAPNS1P04632 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPNS1P04632 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
CAPNS1P04632 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.5■■□□□ 1.03
CAPNS1P04632 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.5■■□□□ 1.03
CAPNS1P04632 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.49■■□□□ 1.03
CAPNS1P04632 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CAPNS1P04632 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CAPNS1P04632 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CAPNS1P04632 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CAPNS1P04632 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CAPNS1P04632 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CAPNS1P04632 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.49■■□□□ 1.03
CAPNS1P04632 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CAPNS1P04632 AL109923.1-201ENST00000618799 583 ntBASIC21.49■■□□□ 1.03
CAPNS1P04632 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CAPNS1P04632 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CAPNS1P04632 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CAPNS1P04632 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.49■■□□□ 1.03
CAPNS1P04632 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.48■■□□□ 1.03
CAPNS1P04632 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPNS1P04632 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.48■■□□□ 1.03
CAPNS1P04632 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPNS1P04632 AL355802.2-201ENST00000402069 882 ntBASIC21.48■■□□□ 1.03
CAPNS1P04632 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CAPNS1P04632 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CAPNS1P04632 CROCCP5-201ENST00000436658 830 ntBASIC21.48■■□□□ 1.03
CAPNS1P04632 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CAPNS1P04632 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.48■■□□□ 1.03
CAPNS1P04632 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.48■■□□□ 1.03
CAPNS1P04632 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPNS1P04632 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CAPNS1P04632 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CAPNS1P04632 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPNS1P04632 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.48■■□□□ 1.03
CAPNS1P04632 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.48■■□□□ 1.03
CAPNS1P04632 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPNS1P04632 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPNS1P04632 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPNS1P04632 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPNS1P04632 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms