Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 KRT19P1-201ENST00000405746 1186 ntBASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TBC1D3FA6NER0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.65■■□□□ 1.06
TBC1D3FA6NER0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TBC1D3FA6NER0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.64■■□□□ 1.06
TBC1D3FA6NER0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TBC1D3FA6NER0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TBC1D3FA6NER0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TBC1D3FA6NER0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TBC1D3FA6NER0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 AC006015.1-201ENST00000429970 570 ntBASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
TBC1D3FA6NER0 AC009237.3-201ENST00000393279 1427 ntBASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 AC080038.1-201ENST00000611274 1154 ntBASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 AC005224.4-201ENST00000583262 1652 ntBASIC21.63■■□□□ 1.05
TBC1D3FA6NER0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D3FA6NER0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 AC079089.2-201ENST00000531211 1277 ntBASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TBC1D3FA6NER0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TBC1D3FA6NER0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3FA6NER0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3FA6NER0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3FA6NER0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3FA6NER0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.58■■□□□ 1.05
TBC1D3FA6NER0 ESRRAP2-201ENST00000418437 1549 ntBASIC21.58■■□□□ 1.04
TBC1D3FA6NER0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.58■■□□□ 1.04
TBC1D3FA6NER0 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms