Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 DUX4L19-201ENST00000557448 1267 ntBASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AL138724.1-201ENST00000606771 1088 ntBASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SAA2-SAA4A0A096LPE2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SAA2-SAA4A0A096LPE2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AL136116.3-201ENST00000402907 1138 ntBASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 FBXW4P1-201ENST00000426721 2239 ntBASIC17.7■□□□□ 0.42
SAA2-SAA4A0A096LPE2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AC010525.1-201ENST00000585559 441 ntBASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AC131212.1-201ENST00000613771 668 ntBASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AC136469.2-201ENST00000623944 1028 ntBASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AC068587.7-201ENST00000641602 218 ntBASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SAA2-SAA4A0A096LPE2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SAA2-SAA4A0A096LPE2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SAA2-SAA4A0A096LPE2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.68■□□□□ 0.42
SAA2-SAA4A0A096LPE2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SAA2-SAA4A0A096LPE2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SAA2-SAA4A0A096LPE2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SAA2-SAA4A0A096LPE2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SAA2-SAA4A0A096LPE2 AC011298.3-201ENST00000615796 283 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms