Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
THSD1Q9NS62 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.16■□□□□ 0.98
THSD1Q9NS62 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
THSD1Q9NS62 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
THSD1Q9NS62 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
THSD1Q9NS62 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THSD1Q9NS62 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.15■□□□□ 0.98
THSD1Q9NS62 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.15■□□□□ 0.98
THSD1Q9NS62 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.15■□□□□ 0.98
THSD1Q9NS62 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.15■□□□□ 0.98
THSD1Q9NS62 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
THSD1Q9NS62 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
THSD1Q9NS62 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.15■□□□□ 0.98
THSD1Q9NS62 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
THSD1Q9NS62 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.15■□□□□ 0.98
THSD1Q9NS62 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
THSD1Q9NS62 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THSD1Q9NS62 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
THSD1Q9NS62 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
THSD1Q9NS62 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
THSD1Q9NS62 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
THSD1Q9NS62 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.14■□□□□ 0.98
THSD1Q9NS62 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.14■□□□□ 0.98
THSD1Q9NS62 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.14■□□□□ 0.97
THSD1Q9NS62 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
THSD1Q9NS62 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.14■□□□□ 0.97
THSD1Q9NS62 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
THSD1Q9NS62 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.14■□□□□ 0.97
THSD1Q9NS62 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.14■□□□□ 0.97
THSD1Q9NS62 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THSD1Q9NS62 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 AC006015.1-201ENST00000429970 570 ntBASIC21.13■□□□□ 0.97
THSD1Q9NS62 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
THSD1Q9NS62 AC137761.2-201ENST00000561729 223 ntBASIC21.13■□□□□ 0.97
THSD1Q9NS62 AC145350.3-201ENST00000569033 163 ntBASIC21.13■□□□□ 0.97
THSD1Q9NS62 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.13■□□□□ 0.97
THSD1Q9NS62 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.13■□□□□ 0.97
THSD1Q9NS62 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.13■□□□□ 0.97
THSD1Q9NS62 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THSD1Q9NS62 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.12■□□□□ 0.97
THSD1Q9NS62 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
THSD1Q9NS62 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THSD1Q9NS62 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
THSD1Q9NS62 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.12■□□□□ 0.97
THSD1Q9NS62 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.12■□□□□ 0.97
THSD1Q9NS62 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
THSD1Q9NS62 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THSD1Q9NS62 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THSD1Q9NS62 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THSD1Q9NS62 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.12■□□□□ 0.97
THSD1Q9NS62 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
THSD1Q9NS62 AC233723.2-201ENST00000623798 2106 ntBASIC21.12■□□□□ 0.97
THSD1Q9NS62 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THSD1Q9NS62 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THSD1Q9NS62 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
THSD1Q9NS62 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THSD1Q9NS62 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THSD1Q9NS62 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
THSD1Q9NS62 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
THSD1Q9NS62 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THSD1Q9NS62 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THSD1Q9NS62 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 FP325331.1-202ENST00000623531 1380 ntBASIC21.1■□□□□ 0.97
THSD1Q9NS62 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.1■□□□□ 0.97
THSD1Q9NS62 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THSD1Q9NS62 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.1■□□□□ 0.97
THSD1Q9NS62 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms