Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 AC137767.1-201ENST00000602918 1920 ntBASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC6A20Q9NP91 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 MIR572-201ENST00000384983 95 ntBASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC6A20Q9NP91 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 AC127496.7-201ENST00000625110 1798 ntBASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A20Q9NP91 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A20Q9NP91 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A20Q9NP91 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 IRS3P-201ENST00000223076 1006 ntBASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 AC079089.2-201ENST00000531211 1277 ntBASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 MIR5787-201ENST00000611784 55 ntBASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A20Q9NP91 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 AC080038.3-201ENST00000623346 1952 ntBASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A20Q9NP91 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 AC233723.2-201ENST00000623798 2106 ntBASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A20Q9NP91 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 LINC00526-201ENST00000581067 1875 ntBASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 SMUG1P1-201ENST00000590640 811 ntBASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 AC105233.4-201ENST00000642045 216 ntBASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 AC139530.1-201ENST00000575312 1977 ntBASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 AC012676.1-201ENST00000574705 1949 ntBASIC20.86■□□□□ 0.93
SLC6A20Q9NP91 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms