Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NKX6-2Q9C056 SMPD5-203ENST00000639008 1464 ntBASIC17.56■□□□□ 0.4
NKX6-2Q9C056 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX6-2Q9C056 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-2Q9C056 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-2Q9C056 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 AL157400.5-201ENST00000507624 621 ntBASIC17.53■□□□□ 0.4
NKX6-2Q9C056 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-2Q9C056 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 LETM1P2-201ENST00000597330 2178 ntBASIC17.52■□□□□ 0.4
NKX6-2Q9C056 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NKX6-2Q9C056 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-2Q9C056 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-2Q9C056 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms