Protein–RNA interactions for Protein: Q99337

TY1B-NL2, Transposon Ty1-NL2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL2Q99337 RPO21YDL140C 5202 nt3.89□□□□□ -1.79
TY1B-NL2Q99337 YOL019WYOL019W 1656 nt3.89□□□□□ -1.79
TY1B-NL2Q99337 SIZ1YDR409W 2715 nt3.89□□□□□ -1.79
TY1B-NL2Q99337 GPI1YGR216C 1830 nt3.88□□□□□ -1.79
TY1B-NL2Q99337 RNT1YMR239C 1416 nt3.88□□□□□ -1.79
TY1B-NL2Q99337 MPC3YGR243W 441 nt3.88□□□□□ -1.79
TY1B-NL2Q99337 YLR278CYLR278C 4026 nt3.88□□□□□ -1.79
TY1B-NL2Q99337 YGR079WYGR079W 1113 nt3.87□□□□□ -1.79
TY1B-NL2Q99337 RPA135YPR010C 3612 nt3.87□□□□□ -1.79
TY1B-NL2Q99337 YHR078WYHR078W 1659 nt3.87□□□□□ -1.79
TY1B-NL2Q99337 CDC16YKL022C 2523 nt3.87□□□□□ -1.79
TY1B-NL2Q99337 RAM1YDL090C 1296 nt3.87□□□□□ -1.79
TY1B-NL2Q99337 CNL1YDR357C 369 nt3.87□□□□□ -1.79
TY1B-NL2Q99337 ARP4YJL081C 1470 nt3.87□□□□□ -1.79
TY1B-NL2Q99337 FMP25YLR077W 1752 nt3.86□□□□□ -1.79
TY1B-NL2Q99337 PRR2YDL214C 2100 nt3.86□□□□□ -1.79
TY1B-NL2Q99337 ICY1YMR195W 384 nt3.86□□□□□ -1.79
TY1B-NL2Q99337 YPL039WYPL039W 951 nt3.86□□□□□ -1.79
TY1B-NL2Q99337 YPR050CYPR050C 414 nt3.86□□□□□ -1.79
TY1B-NL2Q99337 YLR177WYLR177W 1887 nt3.86□□□□□ -1.79
TY1B-NL2Q99337 MIT1YEL007W 2001 nt3.85□□□□□ -1.79
TY1B-NL2Q99337 TSC11YER093C 4293 nt3.85□□□□□ -1.79
TY1B-NL2Q99337 YGR122WYGR122W 1209 nt3.85□□□□□ -1.79
TY1B-NL2Q99337 SAP155YFR040W 3009 nt3.85□□□□□ -1.79
TY1B-NL2Q99337 TFB2YPL122C 1542 nt3.85□□□□□ -1.79
TY1B-NL2Q99337 REV3YPL167C 4515 nt3.85□□□□□ -1.79
TY1B-NL2Q99337 SSY1YDR160W 2559 nt3.85□□□□□ -1.79
TY1B-NL2Q99337 MCP2YLR253W 1710 nt3.85□□□□□ -1.79
TY1B-NL2Q99337 FAP7YDL166C 594 nt3.84□□□□□ -1.79
TY1B-NL2Q99337 CSR2YPR030W 3366 nt3.84□□□□□ -1.79
TY1B-NL2Q99337 ATG18YFR021W 1503 nt3.84□□□□□ -1.8
TY1B-NL2Q99337 PTP3YER075C 2787 nt3.84□□□□□ -1.8
TY1B-NL2Q99337 SRC1YML034W 2505 nt3.84□□□□□ -1.8
TY1B-NL2Q99337 YDR222WYDR222W 1248 nt3.84□□□□□ -1.8
TY1B-NL2Q99337 CHS2YBR038W 2892 nt3.84□□□□□ -1.8
TY1B-NL2Q99337 GCR2YNL199C 1605 nt3.83□□□□□ -1.8
TY1B-NL2Q99337 NEW1YPL226W 3591 nt3.83□□□□□ -1.8
TY1B-NL2Q99337 PSY2YNL201C 2577 nt3.83□□□□□ -1.8
TY1B-NL2Q99337 NPR3YHL023C 3441 nt3.83□□□□□ -1.8
TY1B-NL2Q99337 YGR269WYGR269W 327 nt3.83□□□□□ -1.8
TY1B-NL2Q99337 YDL180WYDL180W 1644 nt3.83□□□□□ -1.8
TY1B-NL2Q99337 ESL2YKR096W 3588 nt3.82□□□□□ -1.8
TY1B-NL2Q99337 YSH1YLR277C 2340 nt3.82□□□□□ -1.8
TY1B-NL2Q99337 PEF1YGR058W 1008 nt3.82□□□□□ -1.8
TY1B-NL2Q99337 ASG7YJL170C 630 nt3.82□□□□□ -1.8
TY1B-NL2Q99337 XRN1YGL173C 4587 nt3.82□□□□□ -1.8
TY1B-NL2Q99337 YEL025CYEL025C 3567 nt3.82□□□□□ -1.8
TY1B-NL2Q99337 MDM30YLR368W 1797 nt3.82□□□□□ -1.8
TY1B-NL2Q99337 PUG1YER185W 912 nt3.81□□□□□ -1.8
TY1B-NL2Q99337 RAD33YML011C 534 nt3.81□□□□□ -1.8
TY1B-NL2Q99337 RHO5YNL180C 996 nt3.81□□□□□ -1.8
TY1B-NL2Q99337 YFL051CYFL051C 483 nt3.81□□□□□ -1.8
TY1B-NL2Q99337 RRP46YGR095C 672 nt3.81□□□□□ -1.8
TY1B-NL2Q99337 YBR298C-AYBR298C-A 222 nt3.81□□□□□ -1.8
TY1B-NL2Q99337 EMC1YCL045C 2283 nt3.8□□□□□ -1.8
TY1B-NL2Q99337 HEF3YNL014W 3135 nt3.8□□□□□ -1.8
TY1B-NL2Q99337 URA2YJL130C 6645 nt3.8□□□□□ -1.8
TY1B-NL2Q99337 MPS2YGL075C 1164 nt3.8□□□□□ -1.8
TY1B-NL2Q99337 CIN8YEL061C 3003 nt3.8□□□□□ -1.8
TY1B-NL2Q99337 LAC1YKL008C 1257 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 EMC6YLL014W 327 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 YLR255CYLR255C 354 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 SMA2YML066C 1110 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 YOR338WYOR338W 1092 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 OM14YBR230C 405 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 KRI1YNL308C 1776 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 PEX1YKL197C 3132 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 TSR1YDL060W 2367 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 KIP1YBL063W 3336 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 PRP22YER013W 3438 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 HOF1YMR032W 2010 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 TRE2YOR256C 2430 nt3.79□□□□□ -1.8
TY1B-NL2Q99337 YIR020W-AYIR020W-A 243 nt3.78□□□□□ -1.8
TY1B-NL2Q99337 YMR294W-AYMR294W-A 360 nt3.78□□□□□ -1.8
TY1B-NL2Q99337 BUD5YCR038C 1929 nt3.78□□□□□ -1.8
TY1B-NL2Q99337 OSW7YFR039C 1533 nt3.78□□□□□ -1.8
TY1B-NL2Q99337 SAM37YMR060C 984 nt3.78□□□□□ -1.8
TY1B-NL2Q99337 CMD1YBR109C 444 nt3.78□□□□□ -1.8
TY1B-NL2Q99337 YHR080CYHR080C 4038 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 HOS3YPL116W 2094 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 PTI1YGR156W 1278 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 MHO1YJR008W 1017 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 YAL037WYAL037W 804 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 RPL6AYML073C 531 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 FMP41YNL168C 780 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 APM4YOL062C 1476 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 ARP8YOR141C 2646 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 ABP140YOR239W 1887 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 MCM4YPR019W 2802 nt3.77□□□□□ -1.81
TY1B-NL2Q99337 YDR537CYDR537C 606 nt3.76□□□□□ -1.81
TY1B-NL2Q99337 VPS17YOR132W 1656 nt3.76□□□□□ -1.81
TY1B-NL2Q99337 SDS23YGL056C 1584 nt3.76□□□□□ -1.81
TY1B-NL2Q99337 MPC54YOR177C 1395 nt3.76□□□□□ -1.81
TY1B-NL2Q99337 COM2YER130C 1332 nt3.76□□□□□ -1.81
TY1B-NL2Q99337 tW(CCA)G1tW(CCA)G1 72 nt3.75□□□□□ -1.81
TY1B-NL2Q99337 tW(CCA)G2tW(CCA)G2 72 nt3.75□□□□□ -1.81
TY1B-NL2Q99337 tW(CCA)JtW(CCA)J 72 nt3.75□□□□□ -1.81
TY1B-NL2Q99337 tW(CCA)KtW(CCA)K 72 nt3.75□□□□□ -1.81
TY1B-NL2Q99337 tW(CCA)MtW(CCA)M 72 nt3.75□□□□□ -1.81
TY1B-NL2Q99337 tW(CCA)PtW(CCA)P 72 nt3.75□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms