Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56Q96MV1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56Q96MV1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEM56Q96MV1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56Q96MV1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56Q96MV1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TMEM56Q96MV1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56Q96MV1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56Q96MV1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM56Q96MV1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56Q96MV1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56Q96MV1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56Q96MV1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM56Q96MV1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TMEM56Q96MV1 DUX4L4-201ENST00000566884 1269 ntBASIC17.85■□□□□ 0.45
TMEM56Q96MV1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEM56Q96MV1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TMEM56Q96MV1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56Q96MV1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM56Q96MV1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM56Q96MV1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
TMEM56Q96MV1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TMEM56Q96MV1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM56Q96MV1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TMEM56Q96MV1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 KRT8P33-201ENST00000508125 1423 ntBASIC17.82■□□□□ 0.44
TMEM56Q96MV1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 AC103724.3-201ENST00000564481 992 ntBASIC17.82■□□□□ 0.44
TMEM56Q96MV1 AC137630.3-201ENST00000607245 391 ntBASIC17.82■□□□□ 0.44
TMEM56Q96MV1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56Q96MV1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56Q96MV1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56Q96MV1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56Q96MV1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56Q96MV1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
TMEM56Q96MV1 AC103834.1-201ENST00000520383 144 ntBASIC17.81■□□□□ 0.44
TMEM56Q96MV1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56Q96MV1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.81■□□□□ 0.44
TMEM56Q96MV1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56Q96MV1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms