Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.2■□□□□ 0.18
CMC4P56277 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMC4P56277 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CMC4P56277 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.19■□□□□ 0.18
CMC4P56277 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.19■□□□□ 0.18
CMC4P56277 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CMC4P56277 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CMC4P56277 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CMC4P56277 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.19■□□□□ 0.18
CMC4P56277 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.19■□□□□ 0.18
CMC4P56277 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.19■□□□□ 0.18
CMC4P56277 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.19■□□□□ 0.18
CMC4P56277 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMC4P56277 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.19■□□□□ 0.18
CMC4P56277 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.18■□□□□ 0.18
CMC4P56277 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.18■□□□□ 0.18
CMC4P56277 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.18■□□□□ 0.18
CMC4P56277 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.18■□□□□ 0.18
CMC4P56277 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.18■□□□□ 0.18
CMC4P56277 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.18■□□□□ 0.18
CMC4P56277 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.18■□□□□ 0.18
CMC4P56277 AC105233.4-201ENST00000642045 216 ntBASIC16.18■□□□□ 0.18
CMC4P56277 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CMC4P56277 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.18■□□□□ 0.18
CMC4P56277 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMC4P56277 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CMC4P56277 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CMC4P56277 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.17■□□□□ 0.18
CMC4P56277 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.17■□□□□ 0.18
CMC4P56277 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.17■□□□□ 0.18
CMC4P56277 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CMC4P56277 OR7E47P-201ENST00000546390 1422 ntBASIC16.17■□□□□ 0.18
CMC4P56277 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.17■□□□□ 0.18
CMC4P56277 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.17■□□□□ 0.18
CMC4P56277 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMC4P56277 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CMC4P56277 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CMC4P56277 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CMC4P56277 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.16■□□□□ 0.18
CMC4P56277 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.16■□□□□ 0.18
CMC4P56277 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CMC4P56277 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMC4P56277 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CMC4P56277 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMC4P56277 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMC4P56277 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CMC4P56277 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMC4P56277 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMC4P56277 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.15■□□□□ 0.18
CMC4P56277 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CMC4P56277 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMC4P56277 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CMC4P56277 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMC4P56277 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CMC4P56277 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CMC4P56277 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMC4P56277 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMC4P56277 AC127496.7-201ENST00000625110 1798 ntBASIC16.14■□□□□ 0.17
CMC4P56277 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMC4P56277 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms