Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 RAD18YCR066W 1464 nt5.48□□□□□ -1.53
MSH3P25336 ENT1YDL161W 1365 nt5.48□□□□□ -1.53
MSH3P25336 YDR248CYDR248C 582 nt5.48□□□□□ -1.53
MSH3P25336 AUA1YFL010W-A 285 nt5.48□□□□□ -1.53
MSH3P25336 MET14YKL001C 609 nt5.48□□□□□ -1.53
MSH3P25336 AIM36YMR157C 768 nt5.48□□□□□ -1.53
MSH3P25336 YCL002CYCL002C 792 nt5.48□□□□□ -1.53
MSH3P25336 ROT2YBR229C 2865 nt5.48□□□□□ -1.53
MSH3P25336 PMS1YNL082W 2622 nt5.47□□□□□ -1.53
MSH3P25336 DOA1YKL213C 2148 nt5.47□□□□□ -1.53
MSH3P25336 YDL012CYDL012C 324 nt5.47□□□□□ -1.53
MSH3P25336 DTD1YDL219W 453 nt5.47□□□□□ -1.53
MSH3P25336 MLC1YGL106W 450 nt5.47□□□□□ -1.53
MSH3P25336 YGL138CYGL138C 1038 nt5.47□□□□□ -1.53
MSH3P25336 RMR1YGL250W 726 nt5.47□□□□□ -1.53
MSH3P25336 YGR042WYGR042W 816 nt5.47□□□□□ -1.53
MSH3P25336 YGR182CYGR182C 354 nt5.47□□□□□ -1.53
MSH3P25336 CAP2YIL034C 864 nt5.47□□□□□ -1.53
MSH3P25336 YIL163CYIL163C 354 nt5.47□□□□□ -1.53
MSH3P25336 MNN11YJL183W 1269 nt5.47□□□□□ -1.53
MSH3P25336 FUN19YAL034C 1242 nt5.47□□□□□ -1.53
MSH3P25336 YML057C-AYML057C-A 390 nt5.47□□□□□ -1.53
MSH3P25336 ECM13YBL043W 774 nt5.47□□□□□ -1.53
MSH3P25336 YBL059WYBL059W 582 nt5.47□□□□□ -1.53
MSH3P25336 SPC29YPL124W 762 nt5.47□□□□□ -1.53
MSH3P25336 snR17bsnR17b 332 nt5.47□□□□□ -1.53
MSH3P25336 FAA3YIL009W 2085 nt5.47□□□□□ -1.53
MSH3P25336 PGM2YMR105C 1710 nt5.46□□□□□ -1.54
MSH3P25336 SLC1YDL052C 912 nt5.46□□□□□ -1.54
MSH3P25336 YDR134CYDR134C 411 nt5.46□□□□□ -1.54
MSH3P25336 WBP1YEL002C 1293 nt5.46□□□□□ -1.54
MSH3P25336 BUD25YER014C-A 462 nt5.46□□□□□ -1.54
MSH3P25336 THI5YFL058W 1023 nt5.46□□□□□ -1.54
MSH3P25336 SNO3YFL060C 669 nt5.46□□□□□ -1.54
MSH3P25336 YGL194C-AYGL194C-A 243 nt5.46□□□□□ -1.54
MSH3P25336 TAD1YGL243W 1203 nt5.46□□□□□ -1.54
MSH3P25336 YGR160WYGR160W 612 nt5.46□□□□□ -1.54
MSH3P25336 YJL028WYJL028W 336 nt5.46□□□□□ -1.54
MSH3P25336 SFT1YKL006C-A 294 nt5.46□□□□□ -1.54
MSH3P25336 RPS30AYLR287C-A 192 nt5.46□□□□□ -1.54
MSH3P25336 YNL203CYNL203C 612 nt5.46□□□□□ -1.54
MSH3P25336 THI12YNL332W 1023 nt5.46□□□□□ -1.54
MSH3P25336 SNO2YNL334C 669 nt5.46□□□□□ -1.54
MSH3P25336 HSH49YOR319W 642 nt5.46□□□□□ -1.54
MSH3P25336 OXR1YPL196W 822 nt5.46□□□□□ -1.54
MSH3P25336 CDC28YBR160W 897 nt5.46□□□□□ -1.54
MSH3P25336 NGL3YML118W 1518 nt5.46□□□□□ -1.54
MSH3P25336 COT1YOR316C 1320 nt5.46□□□□□ -1.54
MSH3P25336 YCL068CYCL068C 783 nt5.45□□□□□ -1.54
MSH3P25336 YFL064CYFL064C 525 nt5.45□□□□□ -1.54
MSH3P25336 YHL046W-AYHL046W-A 327 nt5.45□□□□□ -1.54
MSH3P25336 SSO2YMR183C 888 nt5.45□□□□□ -1.54
MSH3P25336 PEX15YOL044W 1152 nt5.45□□□□□ -1.54
MSH3P25336 ESF1YDR365C 1887 nt5.45□□□□□ -1.54
MSH3P25336 GPB1YOR371C 2694 nt5.44□□□□□ -1.54
MSH3P25336 TEA1YOR337W 2280 nt5.44□□□□□ -1.54
MSH3P25336 PDR10YOR328W 4695 nt5.44□□□□□ -1.54
MSH3P25336 YCR085WYCR085W 354 nt5.44□□□□□ -1.54
MSH3P25336 YCR101CYCR101C 549 nt5.44□□□□□ -1.54
MSH3P25336 ERP3YDL018C 678 nt5.44□□□□□ -1.54
MSH3P25336 KNH1YDL049C 807 nt5.44□□□□□ -1.54
MSH3P25336 YFL051CYFL051C 483 nt5.44□□□□□ -1.54
MSH3P25336 YGL159WYGL159W 1113 nt5.44□□□□□ -1.54
MSH3P25336 TAN1YGL232W 870 nt5.44□□□□□ -1.54
MSH3P25336 CTK1YKL139W 1587 nt5.44□□□□□ -1.54
MSH3P25336 YLR334CYLR334C 381 nt5.44□□□□□ -1.54
MSH3P25336 YLR346CYLR346C 306 nt5.44□□□□□ -1.54
MSH3P25336 ZPS1YOL154W 750 nt5.44□□□□□ -1.54
MSH3P25336 YPL205CYPL205C 345 nt5.44□□□□□ -1.54
MSH3P25336 YPR170W-AYPR170W-A 186 nt5.44□□□□□ -1.54
MSH3P25336 ERV15YBR210W 429 nt5.44□□□□□ -1.54
MSH3P25336 MSE1YOL033W 1611 nt5.44□□□□□ -1.54
MSH3P25336 GAL4YPL248C 2646 nt5.44□□□□□ -1.54
MSH3P25336 YTA12YMR089C 2478 nt5.43□□□□□ -1.54
MSH3P25336 MSN4YKL062W 1893 nt5.43□□□□□ -1.54
MSH3P25336 APL6YGR261C 2430 nt5.43□□□□□ -1.54
MSH3P25336 JEM1YJL073W 1938 nt5.43□□□□□ -1.54
MSH3P25336 YDR118W-AYDR118W-A 117 nt5.43□□□□□ -1.54
MSH3P25336 ARC15YIL062C 465 nt5.43□□□□□ -1.54
MSH3P25336 MEI5YPL121C 669 nt5.43□□□□□ -1.54
MSH3P25336 STP4YDL048C 1473 nt5.43□□□□□ -1.54
MSH3P25336 UBX7YBR273C 1311 nt5.43□□□□□ -1.54
MSH3P25336 KAP114YGL241W 3015 nt5.42□□□□□ -1.54
MSH3P25336 KRE6YPR159W 2163 nt5.42□□□□□ -1.54
MSH3P25336 KEI1YDR367W 666 nt5.42□□□□□ -1.54
MSH3P25336 NKP1YDR383C 717 nt5.42□□□□□ -1.54
MSH3P25336 YDR417CYDR417C 372 nt5.42□□□□□ -1.54
MSH3P25336 NSG1YHR133C 876 nt5.42□□□□□ -1.54
MSH3P25336 YVH1YIR026C 1095 nt5.42□□□□□ -1.54
MSH3P25336 YJL007CYJL007C 315 nt5.42□□□□□ -1.54
MSH3P25336 CAP1YKL007W 807 nt5.42□□□□□ -1.54
MSH3P25336 YMR130WYMR130W 909 nt5.42□□□□□ -1.54
MSH3P25336 MCA1YOR197W 1299 nt5.42□□□□□ -1.54
MSH3P25336 YPL261CYPL261C 309 nt5.42□□□□□ -1.54
MSH3P25336 YDR131CYDR131C 1671 nt5.42□□□□□ -1.54
MSH3P25336 YLR446WYLR446W 1302 nt5.42□□□□□ -1.54
MSH3P25336 ARG4YHR018C 1392 nt5.42□□□□□ -1.54
MSH3P25336 MSH1YHR120W 2880 nt5.41□□□□□ -1.54
MSH3P25336 ACA1YER045C 1470 nt5.41□□□□□ -1.54
MSH3P25336 CAB3YKL088W 1716 nt5.41□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 37.1 ms