Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHCHD1Q96BP2 AF106564.1-201ENST00000607058 2553 ntBASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 AL353803.4-201ENST00000565882 1934 ntBASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHCHD1Q96BP2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 HLA-V-202ENST00000446817 847 ntBASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 AC025884.2-201ENST00000553429 711 ntBASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHCHD1Q96BP2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CHCHD1Q96BP2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L13-201ENST00000554103 1267 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L15-201ENST00000611059 1267 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L23-201ENST00000615195 1269 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L24-201ENST00000617576 1269 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L22-201ENST00000618238 1269 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L20-201ENST00000619712 1269 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L21-201ENST00000622058 1269 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L10-201ENST00000622460 1267 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DUX4L25-201ENST00000624915 1269 ntBASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHCHD1Q96BP2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHCHD1Q96BP2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms