Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA13Q9Y5I0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 AC004687.1-201ENST00000579003 1625 ntBASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA13Q9Y5I0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
PCDHA13Q9Y5I0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.39■■□□□ 1.34
PCDHA13Q9Y5I0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHA13Q9Y5I0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHA13Q9Y5I0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHA13Q9Y5I0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHA13Q9Y5I0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA13Q9Y5I0 AC009102.2-201ENST00000606772 1639 ntBASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 AL024507.2-201ENST00000606070 2574 ntBASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 BX664725.1-201ENST00000438252 379 ntBASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 CA15P2-201ENST00000611168 834 ntBASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA13Q9Y5I0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
PCDHA13Q9Y5I0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHA13Q9Y5I0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
PCDHA13Q9Y5I0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHA13Q9Y5I0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDHA13Q9Y5I0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHA13Q9Y5I0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.35■■□□□ 1.33
PCDHA13Q9Y5I0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHA13Q9Y5I0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHA13Q9Y5I0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHA13Q9Y5I0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms