Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00474Q9P2X8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC00474Q9P2X8 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00474Q9P2X8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00474Q9P2X8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00474Q9P2X8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00474Q9P2X8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC00474Q9P2X8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00474Q9P2X8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00474Q9P2X8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 pRNA.6-201ENST00000610482 90 ntBASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 pRNA.5-201ENST00000612139 90 ntBASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 pRNA.11-201ENST00000618423 90 ntBASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 pRNA.13-201ENST00000619112 90 ntBASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LINC00474Q9P2X8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LINC00474Q9P2X8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LINC00474Q9P2X8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms