Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
EFCC1Q9HA90 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
EFCC1Q9HA90 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
EFCC1Q9HA90 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
EFCC1Q9HA90 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
EFCC1Q9HA90 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
EFCC1Q9HA90 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EFCC1Q9HA90 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EFCC1Q9HA90 KRT18P6-201ENST00000555540 1265 ntBASIC25.56■■□□□ 1.68
EFCC1Q9HA90 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.56■■□□□ 1.68
EFCC1Q9HA90 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
EFCC1Q9HA90 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EFCC1Q9HA90 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.56■■□□□ 1.68
EFCC1Q9HA90 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
EFCC1Q9HA90 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EFCC1Q9HA90 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 KRT18P11-201ENST00000435214 1283 ntBASIC25.54■■□□□ 1.68
EFCC1Q9HA90 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
EFCC1Q9HA90 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
EFCC1Q9HA90 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
EFCC1Q9HA90 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.53■■□□□ 1.68
EFCC1Q9HA90 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.53■■□□□ 1.68
EFCC1Q9HA90 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
EFCC1Q9HA90 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
EFCC1Q9HA90 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
EFCC1Q9HA90 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 AC144652.1-201ENST00000609974 1624 ntBASIC25.52■■□□□ 1.68
EFCC1Q9HA90 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
EFCC1Q9HA90 LINC01529-204ENST00000636474 1715 ntBASIC25.51■■□□□ 1.68
EFCC1Q9HA90 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
EFCC1Q9HA90 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.51■■□□□ 1.67
EFCC1Q9HA90 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.51■■□□□ 1.67
EFCC1Q9HA90 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
EFCC1Q9HA90 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.51■■□□□ 1.67
EFCC1Q9HA90 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
EFCC1Q9HA90 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
EFCC1Q9HA90 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
EFCC1Q9HA90 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
EFCC1Q9HA90 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
EFCC1Q9HA90 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 AC093827.2-201ENST00000512654 315 ntBASIC25.48■■□□□ 1.67
EFCC1Q9HA90 AL121832.2-201ENST00000610979 668 ntBASIC25.48■■□□□ 1.67
EFCC1Q9HA90 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 CLDN5-201ENST00000403084 2357 ntBASIC25.48■■□□□ 1.67
EFCC1Q9HA90 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
EFCC1Q9HA90 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms